Gene : Phvul.005G013400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31060:SF8 - F8M12.23 PROTEIN Genomic Order:  130
Name:  ? Phvul.005G013400 Secondary Identifier:  ? PAC:37153406
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G013400 0.5kb upstream 0.5kb upstream 3366 true Chr05: 1155345-1158710 Phaseolus vulgaris
Phvul.005G013400 0.5kb upstream 0.5kb upstream 500 false Chr05: 1158211-1158710 Phaseolus vulgaris
Phvul.005G013400 0.5kb downstream 0.5kb downstream 3366 true Chr05: 1154845-1158210 Phaseolus vulgaris
Phvul.005G013400 0.5kb downstream 0.5kb downstream 500 false Chr05: 1154845-1155344 Phaseolus vulgaris
Phvul.005G013400 1.0kb upstream 1.0kb upstream 3866 true Chr05: 1155345-1159210 Phaseolus vulgaris
Phvul.005G013400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1158211-1159210 Phaseolus vulgaris
Phvul.005G013400 1.0kb downstream 1.0kb downstream 3866 true Chr05: 1154345-1158210 Phaseolus vulgaris
Phvul.005G013400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1154345-1155344 Phaseolus vulgaris
Phvul.005G013400 2.0kb upstream 2.0kb upstream 4866 true Chr05: 1155345-1160210 Phaseolus vulgaris
Phvul.005G013400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1158211-1160210 Phaseolus vulgaris
Phvul.005G013400 2.0kb downstream 2.0kb downstream 4866 true Chr05: 1153345-1158210 Phaseolus vulgaris
Phvul.005G013400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1153345-1155344 Phaseolus vulgaris
Phvul.005G013400 5.0kb upstream 5.0kb upstream 7866 true Chr05: 1155345-1163210 Phaseolus vulgaris
Phvul.005G013400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1158211-1163210 Phaseolus vulgaris
Phvul.005G013400 5.0kb downstream 5.0kb downstream 7866 true Chr05: 1150345-1158210 Phaseolus vulgaris
Phvul.005G013400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1150345-1155344 Phaseolus vulgaris
Phvul.005G013400 10.0kb upstream 10.0kb upstream 12866 true Chr05: 1155345-1168210 Phaseolus vulgaris
Phvul.005G013400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1158211-1168210 Phaseolus vulgaris
Phvul.005G013400 10.0kb downstream 10.0kb downstream 12866 true Chr05: 1145345-1158210 Phaseolus vulgaris
Phvul.005G013400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1145345-1155344 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296708 5265 Fabidae View MSA
124037517 5270 Rosid View MSA
123748016 5271 Pentapetalae View MSA
122772399 5272 Eudicot View MSA
122051948 5273 Angiosperm View MSA
121312824 5274 Embryophyte View MSA
123349962 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.0317 0.0 44.7187   High
cufflinks 10.6112 0.0 28.867    
cufflinks 8.1694 0.0 22.6232    
cufflinks 12.5616 0.0 33.91    
cufflinks 9.57138 0.0 26.4223    
cufflinks 6.6848 0.0 18.9327   Low
cufflinks 6.7184 0.0 19.0426   Low
cufflinks 7.66818 0.0 21.3701    
cufflinks 7.54001 0.0 21.2049    
cufflinks 15.8113 0.0 41.7819   High
cufflinks 11.3157 0.0 30.7584    

0 Strain