Gene : Phvul.005G001300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  12
Name:  ? Phvul.005G001300 Secondary Identifier:  ? PAC:37153377
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G001300 0.5kb upstream 0.5kb upstream 5429 true Chr05: 119692-125120 Phaseolus vulgaris
Phvul.005G001300 0.5kb upstream 0.5kb upstream 500 false Chr05: 124621-125120 Phaseolus vulgaris
Phvul.005G001300 0.5kb downstream 0.5kb downstream 5429 true Chr05: 119192-124620 Phaseolus vulgaris
Phvul.005G001300 0.5kb downstream 0.5kb downstream 500 false Chr05: 119192-119691 Phaseolus vulgaris
Phvul.005G001300 1.0kb upstream 1.0kb upstream 5929 true Chr05: 119692-125620 Phaseolus vulgaris
Phvul.005G001300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 124621-125620 Phaseolus vulgaris
Phvul.005G001300 1.0kb downstream 1.0kb downstream 5929 true Chr05: 118692-124620 Phaseolus vulgaris
Phvul.005G001300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 118692-119691 Phaseolus vulgaris
Phvul.005G001300 2.0kb upstream 2.0kb upstream 6929 true Chr05: 119692-126620 Phaseolus vulgaris
Phvul.005G001300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 124621-126620 Phaseolus vulgaris
Phvul.005G001300 2.0kb downstream 2.0kb downstream 6929 true Chr05: 117692-124620 Phaseolus vulgaris
Phvul.005G001300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 117692-119691 Phaseolus vulgaris
Phvul.005G001300 5.0kb upstream 5.0kb upstream 9929 true Chr05: 119692-129620 Phaseolus vulgaris
Phvul.005G001300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 124621-129620 Phaseolus vulgaris
Phvul.005G001300 5.0kb downstream 5.0kb downstream 9929 true Chr05: 114692-124620 Phaseolus vulgaris
Phvul.005G001300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 114692-119691 Phaseolus vulgaris
Phvul.005G001300 10.0kb upstream 10.0kb upstream 14929 true Chr05: 119692-134620 Phaseolus vulgaris
Phvul.005G001300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 124621-134620 Phaseolus vulgaris
Phvul.005G001300 10.0kb downstream 10.0kb downstream 14929 true Chr05: 109692-124620 Phaseolus vulgaris
Phvul.005G001300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 109692-119691 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311878 5265 Fabidae View MSA
124065257 5270 Rosid View MSA
123749949 5271 Pentapetalae View MSA
122795253 5272 Eudicot View MSA
122050030 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349493 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.129 0.0 96.6255 High Low
cufflinks 56.4503 0.0 182.958 High  
cufflinks 48.3473 0.0 151.108 High  
cufflinks 34.724 0.0 105.703 High Low
cufflinks 54.3444 0.0 172.051 High  
cufflinks 56.8376 0.0 184.634 High  
cufflinks 62.1888 0.0 209.513 High  
cufflinks 61.7436 0.0 206.483 High  
cufflinks 60.8359 0.0 203.23 High  
cufflinks 56.9538 0.0 183.287 High  
cufflinks 61.3075 0.0 201.725 High  

0 Strain