Gene : Phvul.007G143350 P. vulgaris v2.1
Defline:  (1 of 1) K14306 - nuclear pore complex protein Nup62 (NUP62, NSP1) Genomic Order:  1297
Name:  ? Phvul.007G143350 Secondary Identifier:  ? PAC:37164438
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G143350 0.5kb upstream 0.5kb upstream 10008 true Chr07: 23447429-23457436 Phaseolus vulgaris
Phvul.007G143350 0.5kb upstream 0.5kb upstream 500 false Chr07: 23447429-23447928 Phaseolus vulgaris
Phvul.007G143350 0.5kb downstream 0.5kb downstream 10008 true Chr07: 23447929-23457936 Phaseolus vulgaris
Phvul.007G143350 0.5kb downstream 0.5kb downstream 500 false Chr07: 23457437-23457936 Phaseolus vulgaris
Phvul.007G143350 1.0kb upstream 1.0kb upstream 10508 true Chr07: 23446929-23457436 Phaseolus vulgaris
Phvul.007G143350 1.0kb upstream 1.0kb upstream 1000 false Chr07: 23446929-23447928 Phaseolus vulgaris
Phvul.007G143350 1.0kb downstream 1.0kb downstream 10508 true Chr07: 23447929-23458436 Phaseolus vulgaris
Phvul.007G143350 1.0kb downstream 1.0kb downstream 1000 false Chr07: 23457437-23458436 Phaseolus vulgaris
Phvul.007G143350 2.0kb upstream 2.0kb upstream 11508 true Chr07: 23445929-23457436 Phaseolus vulgaris
Phvul.007G143350 2.0kb upstream 2.0kb upstream 2000 false Chr07: 23445929-23447928 Phaseolus vulgaris
Phvul.007G143350 2.0kb downstream 2.0kb downstream 11508 true Chr07: 23447929-23459436 Phaseolus vulgaris
Phvul.007G143350 2.0kb downstream 2.0kb downstream 2000 false Chr07: 23457437-23459436 Phaseolus vulgaris
Phvul.007G143350 5.0kb upstream 5.0kb upstream 14508 true Chr07: 23442929-23457436 Phaseolus vulgaris
Phvul.007G143350 5.0kb upstream 5.0kb upstream 5000 false Chr07: 23442929-23447928 Phaseolus vulgaris
Phvul.007G143350 5.0kb downstream 5.0kb downstream 14508 true Chr07: 23447929-23462436 Phaseolus vulgaris
Phvul.007G143350 5.0kb downstream 5.0kb downstream 5000 false Chr07: 23457437-23462436 Phaseolus vulgaris
Phvul.007G143350 10.0kb upstream 10.0kb upstream 19508 true Chr07: 23437929-23457436 Phaseolus vulgaris
Phvul.007G143350 10.0kb upstream 10.0kb upstream 10000 false Chr07: 23437929-23447928 Phaseolus vulgaris
Phvul.007G143350 10.0kb downstream 10.0kb downstream 19508 true Chr07: 23447929-23467436 Phaseolus vulgaris
Phvul.007G143350 10.0kb downstream 10.0kb downstream 10000 false Chr07: 23457437-23467436 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310563 5265 Fabidae View MSA
124066082 5270 Rosid View MSA
123740016 5271 Pentapetalae View MSA
122794564 5272 Eudicot View MSA
122044271 5273 Angiosperm View MSA
121348594 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.151 0.0 31.6506    
cufflinks 16.3648 0.0 42.3286    
cufflinks 9.66348 0.0 25.4984   Low
cufflinks 12.7404 0.0 33.0759    
cufflinks 17.1291 0.0 44.2811    
cufflinks 12.7227 0.0 33.1066    
cufflinks 19.9329 0.0 51.5351   High
cufflinks 18.0684 0.0 46.7123    
cufflinks 17.8686 0.0 46.1909    
cufflinks 11.0577 0.0 28.9072   Low
cufflinks 19.8451 0.0 51.3095   High

0 Strain