Gene : Phvul.005G002000 P. vulgaris v2.1
Defline:  (1 of 1) K08734 - DNA mismatch repair protein MLH1 (MLH1) Genomic Order:  19
Name:  ? Phvul.005G002000 Secondary Identifier:  ? PAC:37154056
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G002000 0.5kb upstream 0.5kb upstream 10820 true Chr05: 150887-161706 Phaseolus vulgaris
Phvul.005G002000 0.5kb upstream 0.5kb upstream 500 false Chr05: 161207-161706 Phaseolus vulgaris
Phvul.005G002000 0.5kb downstream 0.5kb downstream 10820 true Chr05: 150387-161206 Phaseolus vulgaris
Phvul.005G002000 0.5kb downstream 0.5kb downstream 500 false Chr05: 150387-150886 Phaseolus vulgaris
Phvul.005G002000 1.0kb upstream 1.0kb upstream 11320 true Chr05: 150887-162206 Phaseolus vulgaris
Phvul.005G002000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 161207-162206 Phaseolus vulgaris
Phvul.005G002000 1.0kb downstream 1.0kb downstream 11320 true Chr05: 149887-161206 Phaseolus vulgaris
Phvul.005G002000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 149887-150886 Phaseolus vulgaris
Phvul.005G002000 2.0kb upstream 2.0kb upstream 12320 true Chr05: 150887-163206 Phaseolus vulgaris
Phvul.005G002000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 161207-163206 Phaseolus vulgaris
Phvul.005G002000 2.0kb downstream 2.0kb downstream 12320 true Chr05: 148887-161206 Phaseolus vulgaris
Phvul.005G002000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 148887-150886 Phaseolus vulgaris
Phvul.005G002000 5.0kb upstream 5.0kb upstream 15320 true Chr05: 150887-166206 Phaseolus vulgaris
Phvul.005G002000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 161207-166206 Phaseolus vulgaris
Phvul.005G002000 5.0kb downstream 5.0kb downstream 15320 true Chr05: 145887-161206 Phaseolus vulgaris
Phvul.005G002000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 145887-150886 Phaseolus vulgaris
Phvul.005G002000 10.0kb upstream 10.0kb upstream 20320 true Chr05: 150887-171206 Phaseolus vulgaris
Phvul.005G002000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 161207-171206 Phaseolus vulgaris
Phvul.005G002000 10.0kb downstream 10.0kb downstream 20320 true Chr05: 140887-161206 Phaseolus vulgaris
Phvul.005G002000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 140887-150886 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300480 5265 Fabidae View MSA
124050491 5270 Rosid View MSA
123746957 5271 Pentapetalae View MSA
122790973 5272 Eudicot View MSA
122045945 5273 Angiosperm View MSA
121345216 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.39754 0.0 9.82605   Low
cufflinks 3.91017 0.0 11.1683    
cufflinks 5.34852 0.0 14.7937    
cufflinks 3.84933 0.0 11.0318    
cufflinks 4.12075 0.0 11.7517    
cufflinks 4.32506 0.0 12.2345    
cufflinks 4.83089 0.0 13.5338    
cufflinks 5.21455 0.0 14.4881    
cufflinks 4.20285 0.0 11.9288    
cufflinks 7.48239 0.0 20.1484   High
cufflinks 3.81656 0.0 10.9574    

0 Strain