Gene : Phvul.005G000900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF238 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  8
Name:  ? Phvul.005G000900 Secondary Identifier:  ? PAC:37154426
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G000900 0.5kb upstream 0.5kb upstream 6008 true Chr05: 90797-96804 Phaseolus vulgaris
Phvul.005G000900 0.5kb upstream 0.5kb upstream 500 false Chr05: 96305-96804 Phaseolus vulgaris
Phvul.005G000900 0.5kb downstream 0.5kb downstream 6008 true Chr05: 90297-96304 Phaseolus vulgaris
Phvul.005G000900 0.5kb downstream 0.5kb downstream 500 false Chr05: 90297-90796 Phaseolus vulgaris
Phvul.005G000900 1.0kb upstream 1.0kb upstream 6508 true Chr05: 90797-97304 Phaseolus vulgaris
Phvul.005G000900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 96305-97304 Phaseolus vulgaris
Phvul.005G000900 1.0kb downstream 1.0kb downstream 6508 true Chr05: 89797-96304 Phaseolus vulgaris
Phvul.005G000900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 89797-90796 Phaseolus vulgaris
Phvul.005G000900 2.0kb upstream 2.0kb upstream 7508 true Chr05: 90797-98304 Phaseolus vulgaris
Phvul.005G000900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 96305-98304 Phaseolus vulgaris
Phvul.005G000900 2.0kb downstream 2.0kb downstream 7508 true Chr05: 88797-96304 Phaseolus vulgaris
Phvul.005G000900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 88797-90796 Phaseolus vulgaris
Phvul.005G000900 5.0kb upstream 5.0kb upstream 10508 true Chr05: 90797-101304 Phaseolus vulgaris
Phvul.005G000900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 96305-101304 Phaseolus vulgaris
Phvul.005G000900 5.0kb downstream 5.0kb downstream 10508 true Chr05: 85797-96304 Phaseolus vulgaris
Phvul.005G000900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 85797-90796 Phaseolus vulgaris
Phvul.005G000900 10.0kb upstream 10.0kb upstream 15508 true Chr05: 90797-106304 Phaseolus vulgaris
Phvul.005G000900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 96305-106304 Phaseolus vulgaris
Phvul.005G000900 10.0kb downstream 10.0kb downstream 15508 true Chr05: 80797-96304 Phaseolus vulgaris
Phvul.005G000900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 80797-90796 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307019 5265 Fabidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.30312 0.0 9.10199    
cufflinks 19.0421 0.0 69.0363   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.723164 0.0 5.69368    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.917656 0.0 7.41837    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain