Gene : Phvul.007G145500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10044:SF127 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Genomic Order:  1317
Name:  ? Phvul.007G145500 Secondary Identifier:  ? PAC:37166103
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

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Gene Structure Displayer

Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G145500 0.5kb upstream 0.5kb upstream 6987 true Chr07: 24008730-24015716 Phaseolus vulgaris
Phvul.007G145500 0.5kb upstream 0.5kb upstream 500 false Chr07: 24008730-24009229 Phaseolus vulgaris
Phvul.007G145500 0.5kb downstream 0.5kb downstream 6987 true Chr07: 24009230-24016216 Phaseolus vulgaris
Phvul.007G145500 0.5kb downstream 0.5kb downstream 500 false Chr07: 24015717-24016216 Phaseolus vulgaris
Phvul.007G145500 1.0kb upstream 1.0kb upstream 7487 true Chr07: 24008230-24015716 Phaseolus vulgaris
Phvul.007G145500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 24008230-24009229 Phaseolus vulgaris
Phvul.007G145500 1.0kb downstream 1.0kb downstream 7487 true Chr07: 24009230-24016716 Phaseolus vulgaris
Phvul.007G145500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 24015717-24016716 Phaseolus vulgaris
Phvul.007G145500 2.0kb upstream 2.0kb upstream 8487 true Chr07: 24007230-24015716 Phaseolus vulgaris
Phvul.007G145500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 24007230-24009229 Phaseolus vulgaris
Phvul.007G145500 2.0kb downstream 2.0kb downstream 8487 true Chr07: 24009230-24017716 Phaseolus vulgaris
Phvul.007G145500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 24015717-24017716 Phaseolus vulgaris
Phvul.007G145500 5.0kb upstream 5.0kb upstream 11487 true Chr07: 24004230-24015716 Phaseolus vulgaris
Phvul.007G145500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 24004230-24009229 Phaseolus vulgaris
Phvul.007G145500 5.0kb downstream 5.0kb downstream 11487 true Chr07: 24009230-24020716 Phaseolus vulgaris
Phvul.007G145500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 24015717-24020716 Phaseolus vulgaris
Phvul.007G145500 10.0kb upstream 10.0kb upstream 16487 true Chr07: 23999230-24015716 Phaseolus vulgaris
Phvul.007G145500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 23999230-24009229 Phaseolus vulgaris
Phvul.007G145500 10.0kb downstream 10.0kb downstream 16487 true Chr07: 24009230-24025716 Phaseolus vulgaris
Phvul.007G145500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 24015717-24025716 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301947 5265 Fabidae View MSA
124065463 5270 Rosid View MSA
123737422 5271 Pentapetalae View MSA
122787073 5272 Eudicot View MSA
122041881 5273 Angiosperm View MSA
121350906 5274 Embryophyte View MSA
123381933 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.79012 0.0 20.1656    
cufflinks 7.24716 0.0 18.7807   Low
cufflinks 9.35454 0.0 24.1797    
cufflinks 6.05607 0.0 15.847   Low
cufflinks 14.7023 0.0 38.277   High
cufflinks 10.1816 0.0 26.3316    
cufflinks 11.3558 0.0 29.4567    
cufflinks 9.4783 0.0 24.5077    
cufflinks 12.3217 0.0 32.0098    
cufflinks 15.8414 0.0 41.4405   High
cufflinks 11.812 0.0 30.6042    

0 Strain