Gene : Phvul.005G004000 P. vulgaris v2.1
Defline:  (1 of 1) K08905 - photosystem I subunit V (psaG) Genomic Order:  39
Name:  ? Phvul.005G004000 Secondary Identifier:  ? PAC:37153040
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G004000 0.5kb upstream 0.5kb upstream 1365 true Chr05: 322969-324333 Phaseolus vulgaris
Phvul.005G004000 0.5kb upstream 0.5kb upstream 500 false Chr05: 322969-323468 Phaseolus vulgaris
Phvul.005G004000 0.5kb downstream 0.5kb downstream 1365 true Chr05: 323469-324833 Phaseolus vulgaris
Phvul.005G004000 0.5kb downstream 0.5kb downstream 500 false Chr05: 324334-324833 Phaseolus vulgaris
Phvul.005G004000 1.0kb upstream 1.0kb upstream 1865 true Chr05: 322469-324333 Phaseolus vulgaris
Phvul.005G004000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 322469-323468 Phaseolus vulgaris
Phvul.005G004000 1.0kb downstream 1.0kb downstream 1865 true Chr05: 323469-325333 Phaseolus vulgaris
Phvul.005G004000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 324334-325333 Phaseolus vulgaris
Phvul.005G004000 2.0kb upstream 2.0kb upstream 2865 true Chr05: 321469-324333 Phaseolus vulgaris
Phvul.005G004000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 321469-323468 Phaseolus vulgaris
Phvul.005G004000 2.0kb downstream 2.0kb downstream 2865 true Chr05: 323469-326333 Phaseolus vulgaris
Phvul.005G004000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 324334-326333 Phaseolus vulgaris
Phvul.005G004000 5.0kb upstream 5.0kb upstream 5865 true Chr05: 318469-324333 Phaseolus vulgaris
Phvul.005G004000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 318469-323468 Phaseolus vulgaris
Phvul.005G004000 5.0kb downstream 5.0kb downstream 5865 true Chr05: 323469-329333 Phaseolus vulgaris
Phvul.005G004000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 324334-329333 Phaseolus vulgaris
Phvul.005G004000 10.0kb upstream 10.0kb upstream 10865 true Chr05: 313469-324333 Phaseolus vulgaris
Phvul.005G004000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 313469-323468 Phaseolus vulgaris
Phvul.005G004000 10.0kb downstream 10.0kb downstream 10865 true Chr05: 323469-334333 Phaseolus vulgaris
Phvul.005G004000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 324334-334333 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304919 5265 Fabidae View MSA
124067062 5270 Rosid View MSA
123737989 5271 Pentapetalae View MSA
122787886 5272 Eudicot View MSA
122046392 5273 Angiosperm View MSA
121348949 5274 Embryophyte View MSA
123425419 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 258.881 0.0 715.169 High  
cufflinks 425.601 0.0 1255.39 High  
cufflinks 3489.19 0.0 16670.8 High High
cufflinks 214.338 0.0 584.789 High  
cufflinks 468.823 0.0 1401.29 High  
cufflinks 1112.73 0.0 3916.6 High  
cufflinks 1.17445 0.0 4.38907   Low
cufflinks 0.356967 0.0 1.46877 Low Low
cufflinks 2.66419 0.0 9.21899   Low
cufflinks 205.771 0.0 557.52 High  
cufflinks 280.051 0.0 783.274 High  

0 Strain