Gene : Phvul.005G006500 P. vulgaris v2.1
Defline:  (1 of 1) K13342 - peroxin-5 (PEX5, PXR1) Genomic Order:  61
Name:  ? Phvul.005G006500 Secondary Identifier:  ? PAC:37152888
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G006500 0.5kb upstream 0.5kb upstream 12648 true Chr05: 536259-548906 Phaseolus vulgaris
Phvul.005G006500 0.5kb upstream 0.5kb upstream 500 false Chr05: 536259-536758 Phaseolus vulgaris
Phvul.005G006500 0.5kb downstream 0.5kb downstream 12648 true Chr05: 536759-549406 Phaseolus vulgaris
Phvul.005G006500 0.5kb downstream 0.5kb downstream 500 false Chr05: 548907-549406 Phaseolus vulgaris
Phvul.005G006500 1.0kb upstream 1.0kb upstream 13148 true Chr05: 535759-548906 Phaseolus vulgaris
Phvul.005G006500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 535759-536758 Phaseolus vulgaris
Phvul.005G006500 1.0kb downstream 1.0kb downstream 13148 true Chr05: 536759-549906 Phaseolus vulgaris
Phvul.005G006500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 548907-549906 Phaseolus vulgaris
Phvul.005G006500 2.0kb upstream 2.0kb upstream 14148 true Chr05: 534759-548906 Phaseolus vulgaris
Phvul.005G006500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 534759-536758 Phaseolus vulgaris
Phvul.005G006500 2.0kb downstream 2.0kb downstream 14148 true Chr05: 536759-550906 Phaseolus vulgaris
Phvul.005G006500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 548907-550906 Phaseolus vulgaris
Phvul.005G006500 5.0kb upstream 5.0kb upstream 17148 true Chr05: 531759-548906 Phaseolus vulgaris
Phvul.005G006500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 531759-536758 Phaseolus vulgaris
Phvul.005G006500 5.0kb downstream 5.0kb downstream 17148 true Chr05: 536759-553906 Phaseolus vulgaris
Phvul.005G006500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 548907-553906 Phaseolus vulgaris
Phvul.005G006500 10.0kb upstream 10.0kb upstream 22148 true Chr05: 526759-548906 Phaseolus vulgaris
Phvul.005G006500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 526759-536758 Phaseolus vulgaris
Phvul.005G006500 10.0kb downstream 10.0kb downstream 22148 true Chr05: 536759-558906 Phaseolus vulgaris
Phvul.005G006500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 548907-558906 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043170 5273 Angiosperm View MSA
122302630 5265 Fabidae View MSA
124068433 5270 Rosid View MSA
123738284 5271 Pentapetalae View MSA
122789462 5272 Eudicot View MSA
121345209 5274 Embryophyte View MSA
123423857 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.1052 0.0 69.7667    
cufflinks 17.5072 0.0 55.6354    
cufflinks 23.8856 0.0 77.7234    
cufflinks 16.8981 0.0 48.9957    
cufflinks 17.5085 0.0 55.6035    
cufflinks 16.5857 0.0 52.6967    
cufflinks 19.5433 0.0 62.6042    
cufflinks 16.5614 0.0 52.7858    
cufflinks 21.348 0.0 69.0201    
cufflinks 40.23 0.0 143.143 High High
cufflinks 16.7759 0.0 53.0983    

0 Strain