Gene : Phvul.007G151600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR19139:SF52 - AQUAPORIN TIP1-1 Genomic Order:  1378
Name:  ? Phvul.007G151600 Secondary Identifier:  ? PAC:37167520
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G151600 0.5kb upstream 0.5kb upstream 2218 true Chr07: 25652550-25654767 Phaseolus vulgaris
Phvul.007G151600 0.5kb upstream 0.5kb upstream 500 false Chr07: 25654268-25654767 Phaseolus vulgaris
Phvul.007G151600 0.5kb downstream 0.5kb downstream 2218 true Chr07: 25652050-25654267 Phaseolus vulgaris
Phvul.007G151600 0.5kb downstream 0.5kb downstream 500 false Chr07: 25652050-25652549 Phaseolus vulgaris
Phvul.007G151600 1.0kb upstream 1.0kb upstream 2718 true Chr07: 25652550-25655267 Phaseolus vulgaris
Phvul.007G151600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 25654268-25655267 Phaseolus vulgaris
Phvul.007G151600 1.0kb downstream 1.0kb downstream 2718 true Chr07: 25651550-25654267 Phaseolus vulgaris
Phvul.007G151600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 25651550-25652549 Phaseolus vulgaris
Phvul.007G151600 2.0kb upstream 2.0kb upstream 3718 true Chr07: 25652550-25656267 Phaseolus vulgaris
Phvul.007G151600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 25654268-25656267 Phaseolus vulgaris
Phvul.007G151600 2.0kb downstream 2.0kb downstream 3718 true Chr07: 25650550-25654267 Phaseolus vulgaris
Phvul.007G151600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 25650550-25652549 Phaseolus vulgaris
Phvul.007G151600 5.0kb upstream 5.0kb upstream 6718 true Chr07: 25652550-25659267 Phaseolus vulgaris
Phvul.007G151600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 25654268-25659267 Phaseolus vulgaris
Phvul.007G151600 5.0kb downstream 5.0kb downstream 6718 true Chr07: 25647550-25654267 Phaseolus vulgaris
Phvul.007G151600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 25647550-25652549 Phaseolus vulgaris
Phvul.007G151600 10.0kb upstream 10.0kb upstream 11718 true Chr07: 25652550-25664267 Phaseolus vulgaris
Phvul.007G151600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 25654268-25664267 Phaseolus vulgaris
Phvul.007G151600 10.0kb downstream 10.0kb downstream 11718 true Chr07: 25642550-25654267 Phaseolus vulgaris
Phvul.007G151600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 25642550-25652549 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618056 5273 Angiosperm View MSA
122254847 5265 Fabidae View MSA
123996826 5270 Rosid View MSA
123571230 5271 Pentapetalae View MSA
122605958 5272 Eudicot View MSA
120890177 5274 Embryophyte View MSA
122930853 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6758 0.0 34.5599   Low
cufflinks 31.419 0.0 81.409    
cufflinks 21.4973 0.0 56.7148    
cufflinks 37.1249 0.0 95.9611 High High
cufflinks 30.0516 0.0 77.8252    
cufflinks 20.6024 0.0 54.3735    
cufflinks 13.1535 0.0 35.6851   Low
cufflinks 16.5065 0.0 44.1933    
cufflinks 18.8948 0.0 50.0161    
cufflinks 26.6034 0.0 69.1978    
cufflinks 41.1548 0.0 106.424 High High

0 Strain