Gene : Phvul.005G006900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR30560//PTHR30560:SF4 - TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE // SUBFAMILY NOT NAMED Genomic Order:  65
Name:  ? Phvul.005G006900 Secondary Identifier:  ? PAC:37154091
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G006900 0.5kb upstream 0.5kb upstream 3711 true Chr05: 571839-575549 Phaseolus vulgaris
Phvul.005G006900 0.5kb upstream 0.5kb upstream 500 false Chr05: 575050-575549 Phaseolus vulgaris
Phvul.005G006900 0.5kb downstream 0.5kb downstream 3711 true Chr05: 571339-575049 Phaseolus vulgaris
Phvul.005G006900 0.5kb downstream 0.5kb downstream 500 false Chr05: 571339-571838 Phaseolus vulgaris
Phvul.005G006900 1.0kb upstream 1.0kb upstream 4211 true Chr05: 571839-576049 Phaseolus vulgaris
Phvul.005G006900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 575050-576049 Phaseolus vulgaris
Phvul.005G006900 1.0kb downstream 1.0kb downstream 4211 true Chr05: 570839-575049 Phaseolus vulgaris
Phvul.005G006900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 570839-571838 Phaseolus vulgaris
Phvul.005G006900 2.0kb upstream 2.0kb upstream 5211 true Chr05: 571839-577049 Phaseolus vulgaris
Phvul.005G006900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 575050-577049 Phaseolus vulgaris
Phvul.005G006900 2.0kb downstream 2.0kb downstream 5211 true Chr05: 569839-575049 Phaseolus vulgaris
Phvul.005G006900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 569839-571838 Phaseolus vulgaris
Phvul.005G006900 5.0kb upstream 5.0kb upstream 8211 true Chr05: 571839-580049 Phaseolus vulgaris
Phvul.005G006900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 575050-580049 Phaseolus vulgaris
Phvul.005G006900 5.0kb downstream 5.0kb downstream 8211 true Chr05: 566839-575049 Phaseolus vulgaris
Phvul.005G006900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 566839-571838 Phaseolus vulgaris
Phvul.005G006900 10.0kb upstream 10.0kb upstream 13211 true Chr05: 571839-585049 Phaseolus vulgaris
Phvul.005G006900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 575050-585049 Phaseolus vulgaris
Phvul.005G006900 10.0kb downstream 10.0kb downstream 13211 true Chr05: 561839-575049 Phaseolus vulgaris
Phvul.005G006900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 561839-571838 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122251803 5265 Fabidae Singleton cluster - no MSA
124073258 5270 Rosid View MSA
123748719 5271 Pentapetalae View MSA
122795151 5272 Eudicot View MSA
122048682 5273 Angiosperm View MSA
121348209 5274 Embryophyte View MSA
123380773 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.92377 0.0 23.7864    
cufflinks 5.54558 0.0 17.3962    
cufflinks 11.2763 0.0 32.5195   High
cufflinks 3.54604 0.0 11.7326    
cufflinks 2.11806 0.0 7.45654    
cufflinks 10.3806 0.0 30.2834   High
cufflinks 0.779594 0.0 2.98219   Low
cufflinks 1.40774 0.0 5.09402    
cufflinks 0.73235 0.0 2.81642   Low
cufflinks 4.55883 0.0 14.6309    
cufflinks 1.73683 0.0 6.22632    

0 Strain