Gene : Phvul.005G005800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31221:SF10 - WRKY TRANSCRIPTION FACTOR 2-RELATED Genomic Order:  54
Name:  ? Phvul.005G005800 Secondary Identifier:  ? PAC:37152561
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G005800 0.5kb upstream 0.5kb upstream 5175 true Chr05: 464288-469462 Phaseolus vulgaris
Phvul.005G005800 0.5kb upstream 0.5kb upstream 500 false Chr05: 468963-469462 Phaseolus vulgaris
Phvul.005G005800 0.5kb downstream 0.5kb downstream 5175 true Chr05: 463788-468962 Phaseolus vulgaris
Phvul.005G005800 0.5kb downstream 0.5kb downstream 500 false Chr05: 463788-464287 Phaseolus vulgaris
Phvul.005G005800 1.0kb upstream 1.0kb upstream 5675 true Chr05: 464288-469962 Phaseolus vulgaris
Phvul.005G005800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 468963-469962 Phaseolus vulgaris
Phvul.005G005800 1.0kb downstream 1.0kb downstream 5675 true Chr05: 463288-468962 Phaseolus vulgaris
Phvul.005G005800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 463288-464287 Phaseolus vulgaris
Phvul.005G005800 2.0kb upstream 2.0kb upstream 6675 true Chr05: 464288-470962 Phaseolus vulgaris
Phvul.005G005800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 468963-470962 Phaseolus vulgaris
Phvul.005G005800 2.0kb downstream 2.0kb downstream 6675 true Chr05: 462288-468962 Phaseolus vulgaris
Phvul.005G005800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 462288-464287 Phaseolus vulgaris
Phvul.005G005800 5.0kb upstream 5.0kb upstream 9675 true Chr05: 464288-473962 Phaseolus vulgaris
Phvul.005G005800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 468963-473962 Phaseolus vulgaris
Phvul.005G005800 5.0kb downstream 5.0kb downstream 9675 true Chr05: 459288-468962 Phaseolus vulgaris
Phvul.005G005800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 459288-464287 Phaseolus vulgaris
Phvul.005G005800 10.0kb upstream 10.0kb upstream 14675 true Chr05: 464288-478962 Phaseolus vulgaris
Phvul.005G005800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 468963-478962 Phaseolus vulgaris
Phvul.005G005800 10.0kb downstream 10.0kb downstream 14675 true Chr05: 454288-468962 Phaseolus vulgaris
Phvul.005G005800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 454288-464287 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308282 5265 Fabidae View MSA
124067872 5270 Rosid View MSA
123750949 5271 Pentapetalae View MSA
122792331 5272 Eudicot View MSA
122049483 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.90388 0.0 31.8163    
cufflinks 9.28879 0.0 33.0446    
cufflinks 17.9729 0.0 58.9576   High
cufflinks 4.18994 0.0 15.3557   Low
cufflinks 14.6881 0.0 47.4573    
cufflinks 10.2186 0.0 33.6153    
cufflinks 16.4479 0.0 58.1311    
cufflinks 8.88741 0.0 31.6344    
cufflinks 12.577 0.0 44.1837    
cufflinks 12.608 0.0 44.275    
cufflinks 14.2808 0.0 46.5517    

0 Strain