Gene : Phvul.007G150400 P. vulgaris v2.1
Defline:  (1 of 4) 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase Genomic Order:  1366
Name:  ? Phvul.007G150400 Secondary Identifier:  ? PAC:37164475
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5690 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6549 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G150400 0.5kb upstream 0.5kb upstream 7386 true Chr07: 24996329-25003714 Phaseolus vulgaris
Phvul.007G150400 0.5kb upstream 0.5kb upstream 500 false Chr07: 25003215-25003714 Phaseolus vulgaris
Phvul.007G150400 0.5kb downstream 0.5kb downstream 7386 true Chr07: 24995829-25003214 Phaseolus vulgaris
Phvul.007G150400 0.5kb downstream 0.5kb downstream 500 false Chr07: 24995829-24996328 Phaseolus vulgaris
Phvul.007G150400 1.0kb upstream 1.0kb upstream 7886 true Chr07: 24996329-25004214 Phaseolus vulgaris
Phvul.007G150400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 25003215-25004214 Phaseolus vulgaris
Phvul.007G150400 1.0kb downstream 1.0kb downstream 7886 true Chr07: 24995329-25003214 Phaseolus vulgaris
Phvul.007G150400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 24995329-24996328 Phaseolus vulgaris
Phvul.007G150400 2.0kb upstream 2.0kb upstream 8886 true Chr07: 24996329-25005214 Phaseolus vulgaris
Phvul.007G150400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 25003215-25005214 Phaseolus vulgaris
Phvul.007G150400 2.0kb downstream 2.0kb downstream 8886 true Chr07: 24994329-25003214 Phaseolus vulgaris
Phvul.007G150400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 24994329-24996328 Phaseolus vulgaris
Phvul.007G150400 5.0kb upstream 5.0kb upstream 11886 true Chr07: 24996329-25008214 Phaseolus vulgaris
Phvul.007G150400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 25003215-25008214 Phaseolus vulgaris
Phvul.007G150400 5.0kb downstream 5.0kb downstream 11886 true Chr07: 24991329-25003214 Phaseolus vulgaris
Phvul.007G150400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 24991329-24996328 Phaseolus vulgaris
Phvul.007G150400 10.0kb upstream 10.0kb upstream 16886 true Chr07: 24996329-25013214 Phaseolus vulgaris
Phvul.007G150400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 25003215-25013214 Phaseolus vulgaris
Phvul.007G150400 10.0kb downstream 10.0kb downstream 16886 true Chr07: 24986329-25003214 Phaseolus vulgaris
Phvul.007G150400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 24986329-24996328 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302631 5265 Fabidae View MSA
124066571 5270 Rosid View MSA
123739712 5271 Pentapetalae View MSA
122792664 5272 Eudicot View MSA
122041698 5273 Angiosperm View MSA
121349734 5274 Embryophyte View MSA
123425496 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.7068 0.0 141.69 High  
cufflinks 35.4354 0.0 91.7992 High  
cufflinks 34.4106 0.0 89.1362    
cufflinks 75.8458 0.0 204.555 High High
cufflinks 33.6603 0.0 87.0794 High  
cufflinks 32.2196 0.0 83.3468    
cufflinks 42.5241 0.0 110.709 High  
cufflinks 44.1221 0.0 115.174 High  
cufflinks 54.3966 0.0 143.183 High  
cufflinks 30.6821 0.0 79.3239   Low
cufflinks 45.2072 0.0 117.854 High  

0 Strain