Gene : Phvul.005G006100 P. vulgaris v2.1
Defline:  (1 of 1) K12179 - COP9 signalosome complex subunit 6 (COPS6, CSN6) Genomic Order:  57
Name:  ? Phvul.005G006100 Secondary Identifier:  ? PAC:37153287
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G006100 0.5kb upstream 0.5kb upstream 7915 true Chr05: 495211-503125 Phaseolus vulgaris
Phvul.005G006100 0.5kb upstream 0.5kb upstream 500 false Chr05: 495211-495710 Phaseolus vulgaris
Phvul.005G006100 0.5kb downstream 0.5kb downstream 7915 true Chr05: 495711-503625 Phaseolus vulgaris
Phvul.005G006100 0.5kb downstream 0.5kb downstream 500 false Chr05: 503126-503625 Phaseolus vulgaris
Phvul.005G006100 1.0kb upstream 1.0kb upstream 8415 true Chr05: 494711-503125 Phaseolus vulgaris
Phvul.005G006100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 494711-495710 Phaseolus vulgaris
Phvul.005G006100 1.0kb downstream 1.0kb downstream 8415 true Chr05: 495711-504125 Phaseolus vulgaris
Phvul.005G006100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 503126-504125 Phaseolus vulgaris
Phvul.005G006100 2.0kb upstream 2.0kb upstream 9415 true Chr05: 493711-503125 Phaseolus vulgaris
Phvul.005G006100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 493711-495710 Phaseolus vulgaris
Phvul.005G006100 2.0kb downstream 2.0kb downstream 9415 true Chr05: 495711-505125 Phaseolus vulgaris
Phvul.005G006100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 503126-505125 Phaseolus vulgaris
Phvul.005G006100 5.0kb upstream 5.0kb upstream 12415 true Chr05: 490711-503125 Phaseolus vulgaris
Phvul.005G006100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 490711-495710 Phaseolus vulgaris
Phvul.005G006100 5.0kb downstream 5.0kb downstream 12415 true Chr05: 495711-508125 Phaseolus vulgaris
Phvul.005G006100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 503126-508125 Phaseolus vulgaris
Phvul.005G006100 10.0kb upstream 10.0kb upstream 17415 true Chr05: 485711-503125 Phaseolus vulgaris
Phvul.005G006100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 485711-495710 Phaseolus vulgaris
Phvul.005G006100 10.0kb downstream 10.0kb downstream 17415 true Chr05: 495711-513125 Phaseolus vulgaris
Phvul.005G006100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 503126-513125 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302157 5265 Fabidae View MSA
124066066 5270 Rosid View MSA
123746091 5271 Pentapetalae View MSA
122792490 5272 Eudicot View MSA
122050330 5273 Angiosperm View MSA
121345331 5274 Embryophyte View MSA
123424156 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.6062 0.0 38.6109    
cufflinks 13.5894 0.0 36.2174   Low
cufflinks 15.8067 0.0 41.6461    
cufflinks 18.754 0.0 48.992    
cufflinks 14.9561 0.0 39.7504    
cufflinks 14.9298 0.0 39.5259    
cufflinks 19.5346 0.0 50.951   High
cufflinks 19.6319 0.0 51.1526   High
cufflinks 20.1462 0.0 52.4544   High
cufflinks 14.8458 0.0 39.3988    
cufflinks 15.2848 0.0 40.4715    

0 Strain