Gene : Phvul.004G171800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24089:SF245 - MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN Genomic Order:  1761
Name:  ? Phvul.004G171800 Secondary Identifier:  ? PAC:37163881
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G171800 0.5kb upstream 0.5kb upstream 2848 true Chr04: 47489816-47492663 Phaseolus vulgaris
Phvul.004G171800 0.5kb upstream 0.5kb upstream 500 false Chr04: 47492164-47492663 Phaseolus vulgaris
Phvul.004G171800 0.5kb downstream 0.5kb downstream 2848 true Chr04: 47489316-47492163 Phaseolus vulgaris
Phvul.004G171800 0.5kb downstream 0.5kb downstream 500 false Chr04: 47489316-47489815 Phaseolus vulgaris
Phvul.004G171800 1.0kb upstream 1.0kb upstream 3348 true Chr04: 47489816-47493163 Phaseolus vulgaris
Phvul.004G171800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47492164-47493163 Phaseolus vulgaris
Phvul.004G171800 1.0kb downstream 1.0kb downstream 3348 true Chr04: 47488816-47492163 Phaseolus vulgaris
Phvul.004G171800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47488816-47489815 Phaseolus vulgaris
Phvul.004G171800 2.0kb upstream 2.0kb upstream 4348 true Chr04: 47489816-47494163 Phaseolus vulgaris
Phvul.004G171800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47492164-47494163 Phaseolus vulgaris
Phvul.004G171800 2.0kb downstream 2.0kb downstream 4348 true Chr04: 47487816-47492163 Phaseolus vulgaris
Phvul.004G171800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47487816-47489815 Phaseolus vulgaris
Phvul.004G171800 5.0kb upstream 5.0kb upstream 7348 true Chr04: 47489816-47497163 Phaseolus vulgaris
Phvul.004G171800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47492164-47497163 Phaseolus vulgaris
Phvul.004G171800 5.0kb downstream 5.0kb downstream 7348 true Chr04: 47484816-47492163 Phaseolus vulgaris
Phvul.004G171800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47484816-47489815 Phaseolus vulgaris
Phvul.004G171800 10.0kb upstream 10.0kb upstream 12348 true Chr04: 47489816-47502163 Phaseolus vulgaris
Phvul.004G171800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47492164-47502163 Phaseolus vulgaris
Phvul.004G171800 10.0kb downstream 10.0kb downstream 12348 true Chr04: 47479816-47492163 Phaseolus vulgaris
Phvul.004G171800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47479816-47489815 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304150 5265 Fabidae View MSA
124063614 5270 Rosid View MSA
123738194 5271 Pentapetalae View MSA
122787359 5272 Eudicot View MSA
122047172 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121348337 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.69346 0.0 13.7487   High
cufflinks 2.00993 0.0 6.50895    
cufflinks 2.36591 0.0 7.51449    
cufflinks 2.74241 0.0 8.61421    
cufflinks 1.37349 0.0 4.66745   Low
cufflinks 1.82155 0.0 5.96342    
cufflinks 3.08775 0.0 9.50017    
cufflinks 2.20408 0.0 7.0254    
cufflinks 3.11652 0.0 9.61401    
cufflinks 1.75793 0.0 5.77917    
cufflinks 2.04641 0.0 6.62973    

0 Strain