Gene : Phvul.007G134500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23257//PTHR23257:SF478 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED Genomic Order:  1213
Name:  ? Phvul.007G134500 Secondary Identifier:  ? PAC:37164934
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G134500 0.5kb upstream 0.5kb upstream 8330 true Chr07: 21071503-21079832 Phaseolus vulgaris
Phvul.007G134500 0.5kb upstream 0.5kb upstream 500 false Chr07: 21079333-21079832 Phaseolus vulgaris
Phvul.007G134500 0.5kb downstream 0.5kb downstream 8330 true Chr07: 21071003-21079332 Phaseolus vulgaris
Phvul.007G134500 0.5kb downstream 0.5kb downstream 500 false Chr07: 21071003-21071502 Phaseolus vulgaris
Phvul.007G134500 1.0kb upstream 1.0kb upstream 8830 true Chr07: 21071503-21080332 Phaseolus vulgaris
Phvul.007G134500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 21079333-21080332 Phaseolus vulgaris
Phvul.007G134500 1.0kb downstream 1.0kb downstream 8830 true Chr07: 21070503-21079332 Phaseolus vulgaris
Phvul.007G134500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 21070503-21071502 Phaseolus vulgaris
Phvul.007G134500 2.0kb upstream 2.0kb upstream 9830 true Chr07: 21071503-21081332 Phaseolus vulgaris
Phvul.007G134500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 21079333-21081332 Phaseolus vulgaris
Phvul.007G134500 2.0kb downstream 2.0kb downstream 9830 true Chr07: 21069503-21079332 Phaseolus vulgaris
Phvul.007G134500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 21069503-21071502 Phaseolus vulgaris
Phvul.007G134500 5.0kb upstream 5.0kb upstream 12830 true Chr07: 21071503-21084332 Phaseolus vulgaris
Phvul.007G134500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 21079333-21084332 Phaseolus vulgaris
Phvul.007G134500 5.0kb downstream 5.0kb downstream 12830 true Chr07: 21066503-21079332 Phaseolus vulgaris
Phvul.007G134500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 21066503-21071502 Phaseolus vulgaris
Phvul.007G134500 10.0kb upstream 10.0kb upstream 17830 true Chr07: 21071503-21089332 Phaseolus vulgaris
Phvul.007G134500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 21079333-21089332 Phaseolus vulgaris
Phvul.007G134500 10.0kb downstream 10.0kb downstream 17830 true Chr07: 21061503-21079332 Phaseolus vulgaris
Phvul.007G134500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 21061503-21071502 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301831 5265 Fabidae View MSA
124060583 5270 Rosid View MSA
123749730 5271 Pentapetalae View MSA
122796699 5272 Eudicot View MSA
122043276 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350927 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.210257 0.0 0.770526 Low  
cufflinks 0.178707 0.0 0.665268 Low Low
cufflinks 0.691467 0.0 2.23038   High
cufflinks 0.332692 0.0 1.17877 Low  
cufflinks 0.24571 0.0 0.895798 Low  
cufflinks 0.992428 0.0 3.08299   High
cufflinks 0.280678 0.0 1.00339 Low  
cufflinks 0.451916 0.0 1.52585 Low  
cufflinks 0.265884 0.0 0.958437 Low  
cufflinks 0.367496 0.0 1.27934    
cufflinks 0.217561 0.0 0.800468 Low  

0 Strain