Gene : Phvul.004G173900 P. vulgaris v2.1
Defline:  (1 of 9) K00850 - 6-phosphofructokinase 1 (pfkA, PFK) Genomic Order:  1782
Name:  ? Phvul.004G173900 Secondary Identifier:  ? PAC:37163430
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ANAEROFRUCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris ANAGLYCOLYSIS-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-1042 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G173900 0.5kb upstream 0.5kb upstream 5562 true Chr04: 47650647-47656208 Phaseolus vulgaris
Phvul.004G173900 0.5kb upstream 0.5kb upstream 500 false Chr04: 47655709-47656208 Phaseolus vulgaris
Phvul.004G173900 0.5kb downstream 0.5kb downstream 5562 true Chr04: 47650147-47655708 Phaseolus vulgaris
Phvul.004G173900 0.5kb downstream 0.5kb downstream 500 false Chr04: 47650147-47650646 Phaseolus vulgaris
Phvul.004G173900 1.0kb upstream 1.0kb upstream 6062 true Chr04: 47650647-47656708 Phaseolus vulgaris
Phvul.004G173900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47655709-47656708 Phaseolus vulgaris
Phvul.004G173900 1.0kb downstream 1.0kb downstream 6062 true Chr04: 47649647-47655708 Phaseolus vulgaris
Phvul.004G173900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47649647-47650646 Phaseolus vulgaris
Phvul.004G173900 2.0kb upstream 2.0kb upstream 7062 true Chr04: 47650647-47657708 Phaseolus vulgaris
Phvul.004G173900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47655709-47657708 Phaseolus vulgaris
Phvul.004G173900 2.0kb downstream 2.0kb downstream 7062 true Chr04: 47648647-47655708 Phaseolus vulgaris
Phvul.004G173900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47648647-47650646 Phaseolus vulgaris
Phvul.004G173900 5.0kb upstream 5.0kb upstream 10062 true Chr04: 47650647-47660708 Phaseolus vulgaris
Phvul.004G173900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47655709-47660708 Phaseolus vulgaris
Phvul.004G173900 5.0kb downstream 5.0kb downstream 10062 true Chr04: 47645647-47655708 Phaseolus vulgaris
Phvul.004G173900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47645647-47650646 Phaseolus vulgaris
Phvul.004G173900 10.0kb upstream 10.0kb upstream 15062 true Chr04: 47650647-47665708 Phaseolus vulgaris
Phvul.004G173900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47655709-47665708 Phaseolus vulgaris
Phvul.004G173900 10.0kb downstream 10.0kb downstream 15062 true Chr04: 47640647-47655708 Phaseolus vulgaris
Phvul.004G173900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47640647-47650646 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
122314168 5265 Fabidae View MSA
124069245 5270 Rosid View MSA
123747020 5271 Pentapetalae View MSA
122788773 5272 Eudicot View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.972 0.0 83.8755    
cufflinks 25.1697 0.0 65.3011    
cufflinks 15.1551 0.0 39.2488   Low
cufflinks 33.4833 0.0 87.6632    
cufflinks 25.7966 0.0 66.8926    
cufflinks 17.5765 0.0 45.4412   Low
cufflinks 72.6016 0.0 204.079 High High
cufflinks 102.976 0.0 302.885 High High
cufflinks 69.81 0.0 194.863 High  
cufflinks 56.3772 0.0 153.757 High  
cufflinks 43.01 0.0 114.47 High  

0 Strain