Gene : Phvul.007G137700 P. vulgaris v2.1
Defline:  (1 of 1) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) Genomic Order:  1243
Name:  ? Phvul.007G137700 Secondary Identifier:  ? PAC:37166660
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G137700 0.5kb upstream 0.5kb upstream 6330 true Chr07: 21591728-21598057 Phaseolus vulgaris
Phvul.007G137700 0.5kb upstream 0.5kb upstream 500 false Chr07: 21597558-21598057 Phaseolus vulgaris
Phvul.007G137700 0.5kb downstream 0.5kb downstream 6330 true Chr07: 21591228-21597557 Phaseolus vulgaris
Phvul.007G137700 0.5kb downstream 0.5kb downstream 500 false Chr07: 21591228-21591727 Phaseolus vulgaris
Phvul.007G137700 1.0kb upstream 1.0kb upstream 6830 true Chr07: 21591728-21598557 Phaseolus vulgaris
Phvul.007G137700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 21597558-21598557 Phaseolus vulgaris
Phvul.007G137700 1.0kb downstream 1.0kb downstream 6830 true Chr07: 21590728-21597557 Phaseolus vulgaris
Phvul.007G137700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 21590728-21591727 Phaseolus vulgaris
Phvul.007G137700 2.0kb upstream 2.0kb upstream 7830 true Chr07: 21591728-21599557 Phaseolus vulgaris
Phvul.007G137700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 21597558-21599557 Phaseolus vulgaris
Phvul.007G137700 2.0kb downstream 2.0kb downstream 7830 true Chr07: 21589728-21597557 Phaseolus vulgaris
Phvul.007G137700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 21589728-21591727 Phaseolus vulgaris
Phvul.007G137700 5.0kb upstream 5.0kb upstream 10830 true Chr07: 21591728-21602557 Phaseolus vulgaris
Phvul.007G137700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 21597558-21602557 Phaseolus vulgaris
Phvul.007G137700 5.0kb downstream 5.0kb downstream 10830 true Chr07: 21586728-21597557 Phaseolus vulgaris
Phvul.007G137700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 21586728-21591727 Phaseolus vulgaris
Phvul.007G137700 10.0kb upstream 10.0kb upstream 15830 true Chr07: 21591728-21607557 Phaseolus vulgaris
Phvul.007G137700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 21597558-21607557 Phaseolus vulgaris
Phvul.007G137700 10.0kb downstream 10.0kb downstream 15830 true Chr07: 21581728-21597557 Phaseolus vulgaris
Phvul.007G137700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 21581728-21591727 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303920 5265 Fabidae View MSA
124071822 5270 Rosid View MSA
123742810 5271 Pentapetalae View MSA
122792687 5272 Eudicot View MSA
122046094 5273 Angiosperm View MSA
121350870 5274 Embryophyte View MSA
123426524 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.4817 0.0 112.64 High High
cufflinks 25.9016 0.0 67.1966    
cufflinks 18.5512 0.0 48.7951   Low
cufflinks 30.5993 0.0 79.2046    
cufflinks 17.8257 0.0 47.3177   Low
cufflinks 19.3031 0.0 50.6325    
cufflinks 23.7766 0.0 61.7758    
cufflinks 23.9081 0.0 62.066    
cufflinks 19.4493 0.0 50.9706    
cufflinks 29.9603 0.0 77.5587    
cufflinks 29.5377 0.0 76.5028    

0 Strain