Gene : Phvul.007G141800 P. vulgaris v2.1
Defline:  (1 of 1) K13140 - integrator complex subunit 3 (INTS3) Genomic Order:  1282
Name:  ? Phvul.007G141800 Secondary Identifier:  ? PAC:37166286
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G141800 0.5kb upstream 0.5kb upstream 1910 true Chr07: 22991919-22993828 Phaseolus vulgaris
Phvul.007G141800 0.5kb upstream 0.5kb upstream 500 false Chr07: 22993329-22993828 Phaseolus vulgaris
Phvul.007G141800 0.5kb downstream 0.5kb downstream 1910 true Chr07: 22991419-22993328 Phaseolus vulgaris
Phvul.007G141800 0.5kb downstream 0.5kb downstream 500 false Chr07: 22991419-22991918 Phaseolus vulgaris
Phvul.007G141800 1.0kb upstream 1.0kb upstream 2410 true Chr07: 22991919-22994328 Phaseolus vulgaris
Phvul.007G141800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 22993329-22994328 Phaseolus vulgaris
Phvul.007G141800 1.0kb downstream 1.0kb downstream 2410 true Chr07: 22990919-22993328 Phaseolus vulgaris
Phvul.007G141800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 22990919-22991918 Phaseolus vulgaris
Phvul.007G141800 2.0kb upstream 2.0kb upstream 3410 true Chr07: 22991919-22995328 Phaseolus vulgaris
Phvul.007G141800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 22993329-22995328 Phaseolus vulgaris
Phvul.007G141800 2.0kb downstream 2.0kb downstream 3410 true Chr07: 22989919-22993328 Phaseolus vulgaris
Phvul.007G141800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 22989919-22991918 Phaseolus vulgaris
Phvul.007G141800 5.0kb upstream 5.0kb upstream 6410 true Chr07: 22991919-22998328 Phaseolus vulgaris
Phvul.007G141800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 22993329-22998328 Phaseolus vulgaris
Phvul.007G141800 5.0kb downstream 5.0kb downstream 6410 true Chr07: 22986919-22993328 Phaseolus vulgaris
Phvul.007G141800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 22986919-22991918 Phaseolus vulgaris
Phvul.007G141800 10.0kb upstream 10.0kb upstream 11410 true Chr07: 22991919-23003328 Phaseolus vulgaris
Phvul.007G141800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 22993329-23003328 Phaseolus vulgaris
Phvul.007G141800 10.0kb downstream 10.0kb downstream 11410 true Chr07: 22981919-22993328 Phaseolus vulgaris
Phvul.007G141800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 22981919-22991918 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026317 5273 Angiosperm View MSA
122301526 5265 Fabidae View MSA
124037150 5270 Rosid View MSA
123745641 5271 Pentapetalae View MSA
122771584 5272 Eudicot View MSA
121296275 5274 Embryophyte View MSA
123334469 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.01487 0.0 6.5806    
cufflinks 2.22906 0.0 7.23569    
cufflinks 0.811857 0.0 2.93181   Low
cufflinks 2.33106 0.0 7.55684    
cufflinks 2.09663 0.0 6.84655    
cufflinks 1.53521 0.0 5.19435    
cufflinks 2.75908 0.0 8.7498    
cufflinks 2.89869 0.0 9.13256   High
cufflinks 1.79534 0.0 6.01514    
cufflinks 2.59939 0.0 8.28978    
cufflinks 2.01254 0.0 6.61676    

0 Strain