Gene : Phvul.007G140600 P. vulgaris v2.1
Defline:  (1 of 1) K00051 - malate dehydrogenase (NADP+) (E1.1.1.82) Genomic Order:  1270
Name:  ? Phvul.007G140600 Secondary Identifier:  ? PAC:37167493
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-241 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7117 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G140600 0.5kb upstream 0.5kb upstream 6248 true Chr07: 22559144-22565391 Phaseolus vulgaris
Phvul.007G140600 0.5kb upstream 0.5kb upstream 500 false Chr07: 22564892-22565391 Phaseolus vulgaris
Phvul.007G140600 0.5kb downstream 0.5kb downstream 6248 true Chr07: 22558644-22564891 Phaseolus vulgaris
Phvul.007G140600 0.5kb downstream 0.5kb downstream 500 false Chr07: 22558644-22559143 Phaseolus vulgaris
Phvul.007G140600 1.0kb upstream 1.0kb upstream 6748 true Chr07: 22559144-22565891 Phaseolus vulgaris
Phvul.007G140600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 22564892-22565891 Phaseolus vulgaris
Phvul.007G140600 1.0kb downstream 1.0kb downstream 6748 true Chr07: 22558144-22564891 Phaseolus vulgaris
Phvul.007G140600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 22558144-22559143 Phaseolus vulgaris
Phvul.007G140600 2.0kb upstream 2.0kb upstream 7748 true Chr07: 22559144-22566891 Phaseolus vulgaris
Phvul.007G140600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 22564892-22566891 Phaseolus vulgaris
Phvul.007G140600 2.0kb downstream 2.0kb downstream 7748 true Chr07: 22557144-22564891 Phaseolus vulgaris
Phvul.007G140600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 22557144-22559143 Phaseolus vulgaris
Phvul.007G140600 5.0kb upstream 5.0kb upstream 10748 true Chr07: 22559144-22569891 Phaseolus vulgaris
Phvul.007G140600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 22564892-22569891 Phaseolus vulgaris
Phvul.007G140600 5.0kb downstream 5.0kb downstream 10748 true Chr07: 22554144-22564891 Phaseolus vulgaris
Phvul.007G140600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 22554144-22559143 Phaseolus vulgaris
Phvul.007G140600 10.0kb upstream 10.0kb upstream 15748 true Chr07: 22559144-22574891 Phaseolus vulgaris
Phvul.007G140600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 22564892-22574891 Phaseolus vulgaris
Phvul.007G140600 10.0kb downstream 10.0kb downstream 15748 true Chr07: 22549144-22564891 Phaseolus vulgaris
Phvul.007G140600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 22549144-22559143 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308757 5265 Fabidae View MSA
124061971 5270 Rosid View MSA
123738843 5271 Pentapetalae View MSA
122785596 5272 Eudicot View MSA
122041880 5273 Angiosperm View MSA
121345837 5274 Embryophyte View MSA
123423785 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 91.8039 0.0 256.645 High  
cufflinks 51.7594 0.0 137.161 High  
cufflinks 117.19 0.0 337.448 High High
cufflinks 52.1218 0.0 137.746 High  
cufflinks 52.5032 0.0 138.974 High  
cufflinks 64.7846 0.0 174.922 High  
cufflinks 8.50091 0.0 23.1031   Low
cufflinks 18.2982 0.0 47.4545   Low
cufflinks 30.98 0.0 80.2257 High  
cufflinks 71.0055 0.0 192.878 High  
cufflinks 41.7377 0.0 109.013 High  

0 Strain