Gene : Phvul.007G141000 P. vulgaris v2.1
Genomic Order:  1274 Name:  ? Phvul.007G141000
Secondary Identifier:  ? PAC:37165133
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G141000 0.5kb upstream 0.5kb upstream 1539 true Chr07: 22671115-22672653 Phaseolus vulgaris
Phvul.007G141000 0.5kb upstream 0.5kb upstream 500 false Chr07: 22671115-22671614 Phaseolus vulgaris
Phvul.007G141000 0.5kb downstream 0.5kb downstream 1539 true Chr07: 22671615-22673153 Phaseolus vulgaris
Phvul.007G141000 0.5kb downstream 0.5kb downstream 500 false Chr07: 22672654-22673153 Phaseolus vulgaris
Phvul.007G141000 1.0kb upstream 1.0kb upstream 2039 true Chr07: 22670615-22672653 Phaseolus vulgaris
Phvul.007G141000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 22670615-22671614 Phaseolus vulgaris
Phvul.007G141000 1.0kb downstream 1.0kb downstream 2039 true Chr07: 22671615-22673653 Phaseolus vulgaris
Phvul.007G141000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 22672654-22673653 Phaseolus vulgaris
Phvul.007G141000 2.0kb upstream 2.0kb upstream 3039 true Chr07: 22669615-22672653 Phaseolus vulgaris
Phvul.007G141000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 22669615-22671614 Phaseolus vulgaris
Phvul.007G141000 2.0kb downstream 2.0kb downstream 3039 true Chr07: 22671615-22674653 Phaseolus vulgaris
Phvul.007G141000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 22672654-22674653 Phaseolus vulgaris
Phvul.007G141000 5.0kb upstream 5.0kb upstream 6039 true Chr07: 22666615-22672653 Phaseolus vulgaris
Phvul.007G141000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 22666615-22671614 Phaseolus vulgaris
Phvul.007G141000 5.0kb downstream 5.0kb downstream 6039 true Chr07: 22671615-22677653 Phaseolus vulgaris
Phvul.007G141000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 22672654-22677653 Phaseolus vulgaris
Phvul.007G141000 10.0kb upstream 10.0kb upstream 11039 true Chr07: 22661615-22672653 Phaseolus vulgaris
Phvul.007G141000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 22661615-22671614 Phaseolus vulgaris
Phvul.007G141000 10.0kb downstream 10.0kb downstream 11039 true Chr07: 22671615-22682653 Phaseolus vulgaris
Phvul.007G141000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 22672654-22682653 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121673487 5273 Angiosperm View MSA
122252308 5265 Fabidae Singleton cluster - no MSA
124075604 5270 Rosid View MSA
123628921 5271 Pentapetalae View MSA
122663155 5272 Eudicot View MSA
120945366 5274 Embryophyte View MSA
122985745 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.89272 0.0 3.08539    
cufflinks 104.672 0.0 297.004 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.655544 0.0 2.39291    
cufflinks 0.0287111 0.0 0.134815 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0539064 0.0 0.235819 Low  
cufflinks 0.0278709 0.0 0.130831 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.35425 0.0 1.33443    
cufflinks 0.0160464 0.0 0.0796069 Low  

0 Strain