Gene : Phvul.004G177900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR27008:SF31 - LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK-RELATED Genomic Order:  1822
Name:  ? Phvul.004G177900 Secondary Identifier:  ? PAC:37162575
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G177900 0.5kb upstream 0.5kb upstream 4154 true Chr04: 47985344-47989497 Phaseolus vulgaris
Phvul.004G177900 0.5kb upstream 0.5kb upstream 500 false Chr04: 47988998-47989497 Phaseolus vulgaris
Phvul.004G177900 0.5kb downstream 0.5kb downstream 4154 true Chr04: 47984844-47988997 Phaseolus vulgaris
Phvul.004G177900 0.5kb downstream 0.5kb downstream 500 false Chr04: 47984844-47985343 Phaseolus vulgaris
Phvul.004G177900 1.0kb upstream 1.0kb upstream 4654 true Chr04: 47985344-47989997 Phaseolus vulgaris
Phvul.004G177900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47988998-47989997 Phaseolus vulgaris
Phvul.004G177900 1.0kb downstream 1.0kb downstream 4654 true Chr04: 47984344-47988997 Phaseolus vulgaris
Phvul.004G177900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47984344-47985343 Phaseolus vulgaris
Phvul.004G177900 2.0kb upstream 2.0kb upstream 5654 true Chr04: 47985344-47990997 Phaseolus vulgaris
Phvul.004G177900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47988998-47990997 Phaseolus vulgaris
Phvul.004G177900 2.0kb downstream 2.0kb downstream 5654 true Chr04: 47983344-47988997 Phaseolus vulgaris
Phvul.004G177900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47983344-47985343 Phaseolus vulgaris
Phvul.004G177900 5.0kb upstream 5.0kb upstream 8654 true Chr04: 47985344-47993997 Phaseolus vulgaris
Phvul.004G177900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47988998-47993997 Phaseolus vulgaris
Phvul.004G177900 5.0kb downstream 5.0kb downstream 8654 true Chr04: 47980344-47988997 Phaseolus vulgaris
Phvul.004G177900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47980344-47985343 Phaseolus vulgaris
Phvul.004G177900 10.0kb upstream 10.0kb upstream 13654 true Chr04: 47985344-47998997 Phaseolus vulgaris
Phvul.004G177900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47988998-47998997 Phaseolus vulgaris
Phvul.004G177900 10.0kb downstream 10.0kb downstream 13654 true Chr04: 47975344-47988997 Phaseolus vulgaris
Phvul.004G177900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47975344-47985343 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298275 5265 Fabidae View MSA
124074219 5270 Rosid View MSA
123750031 5271 Pentapetalae View MSA
122795322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.484481 0.0 1.7308    
cufflinks 1.38251 0.0 4.39669   High
cufflinks 0.830086 0.0 2.78738    
cufflinks 0.714834 0.0 2.46934    
cufflinks 0.249599 0.0 0.948509 Low  
cufflinks 0.956225 0.0 3.16608   High
cufflinks 0.211141 0.0 0.80768 Low  
cufflinks 0.236787 0.0 0.896404 Low  
cufflinks 0.171585 0.0 0.668542 Low Low
cufflinks 0.109383 0.0 0.441929 Low Low
cufflinks 0.491722 0.0 1.7582 Low  

0 Strain