Gene : Phvul.007G140500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31989:SF43 - NAC DOMAIN CONTAINING PROTEIN 53-RELATED Genomic Order:  1269
Name:  ? Phvul.007G140500 Secondary Identifier:  ? PAC:37166794
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G140500 0.5kb upstream 0.5kb upstream 3854 true Chr07: 22535486-22539339 Phaseolus vulgaris
Phvul.007G140500 0.5kb upstream 0.5kb upstream 500 false Chr07: 22535486-22535985 Phaseolus vulgaris
Phvul.007G140500 0.5kb downstream 0.5kb downstream 3854 true Chr07: 22535986-22539839 Phaseolus vulgaris
Phvul.007G140500 0.5kb downstream 0.5kb downstream 500 false Chr07: 22539340-22539839 Phaseolus vulgaris
Phvul.007G140500 1.0kb upstream 1.0kb upstream 4354 true Chr07: 22534986-22539339 Phaseolus vulgaris
Phvul.007G140500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 22534986-22535985 Phaseolus vulgaris
Phvul.007G140500 1.0kb downstream 1.0kb downstream 4354 true Chr07: 22535986-22540339 Phaseolus vulgaris
Phvul.007G140500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 22539340-22540339 Phaseolus vulgaris
Phvul.007G140500 2.0kb upstream 2.0kb upstream 5354 true Chr07: 22533986-22539339 Phaseolus vulgaris
Phvul.007G140500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 22533986-22535985 Phaseolus vulgaris
Phvul.007G140500 2.0kb downstream 2.0kb downstream 5354 true Chr07: 22535986-22541339 Phaseolus vulgaris
Phvul.007G140500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 22539340-22541339 Phaseolus vulgaris
Phvul.007G140500 5.0kb upstream 5.0kb upstream 8354 true Chr07: 22530986-22539339 Phaseolus vulgaris
Phvul.007G140500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 22530986-22535985 Phaseolus vulgaris
Phvul.007G140500 5.0kb downstream 5.0kb downstream 8354 true Chr07: 22535986-22544339 Phaseolus vulgaris
Phvul.007G140500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 22539340-22544339 Phaseolus vulgaris
Phvul.007G140500 10.0kb upstream 10.0kb upstream 13354 true Chr07: 22525986-22539339 Phaseolus vulgaris
Phvul.007G140500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 22525986-22535985 Phaseolus vulgaris
Phvul.007G140500 10.0kb downstream 10.0kb downstream 13354 true Chr07: 22535986-22549339 Phaseolus vulgaris
Phvul.007G140500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 22539340-22549339 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303571 5265 Fabidae View MSA
124065810 5270 Rosid View MSA
123747413 5271 Pentapetalae View MSA
122787453 5272 Eudicot View MSA
122049961 5273 Angiosperm View MSA
121350430 5274 Embryophyte View MSA
123381726 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.0717 0.0 46.724    
cufflinks 22.5051 0.0 58.3432    
cufflinks 17.2133 0.0 44.4931   Low
cufflinks 23.4737 0.0 60.9027    
cufflinks 19.3065 0.0 49.9356    
cufflinks 17.5231 0.0 45.295   Low
cufflinks 23.5562 0.0 61.2127    
cufflinks 24.6533 0.0 64.1228    
cufflinks 24.0741 0.0 62.5574    
cufflinks 37.4805 0.0 99.5273 High High
cufflinks 21.2485 0.0 55.0191    

0 Strain