Gene : Phvul.004G162700 P. vulgaris v2.1
Defline:  (1 of 55) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  1669
Name:  ? Phvul.004G162700 Secondary Identifier:  ? PAC:37163106
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G162700 0.5kb upstream 0.5kb upstream 4564 true Chr04: 46703831-46708394 Phaseolus vulgaris
Phvul.004G162700 0.5kb upstream 0.5kb upstream 500 false Chr04: 46707895-46708394 Phaseolus vulgaris
Phvul.004G162700 0.5kb downstream 0.5kb downstream 4564 true Chr04: 46703331-46707894 Phaseolus vulgaris
Phvul.004G162700 0.5kb downstream 0.5kb downstream 500 false Chr04: 46703331-46703830 Phaseolus vulgaris
Phvul.004G162700 1.0kb upstream 1.0kb upstream 5064 true Chr04: 46703831-46708894 Phaseolus vulgaris
Phvul.004G162700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46707895-46708894 Phaseolus vulgaris
Phvul.004G162700 1.0kb downstream 1.0kb downstream 5064 true Chr04: 46702831-46707894 Phaseolus vulgaris
Phvul.004G162700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46702831-46703830 Phaseolus vulgaris
Phvul.004G162700 2.0kb upstream 2.0kb upstream 6064 true Chr04: 46703831-46709894 Phaseolus vulgaris
Phvul.004G162700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46707895-46709894 Phaseolus vulgaris
Phvul.004G162700 2.0kb downstream 2.0kb downstream 6064 true Chr04: 46701831-46707894 Phaseolus vulgaris
Phvul.004G162700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46701831-46703830 Phaseolus vulgaris
Phvul.004G162700 5.0kb upstream 5.0kb upstream 9064 true Chr04: 46703831-46712894 Phaseolus vulgaris
Phvul.004G162700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46707895-46712894 Phaseolus vulgaris
Phvul.004G162700 5.0kb downstream 5.0kb downstream 9064 true Chr04: 46698831-46707894 Phaseolus vulgaris
Phvul.004G162700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46698831-46703830 Phaseolus vulgaris
Phvul.004G162700 10.0kb upstream 10.0kb upstream 14064 true Chr04: 46703831-46717894 Phaseolus vulgaris
Phvul.004G162700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46707895-46717894 Phaseolus vulgaris
Phvul.004G162700 10.0kb downstream 10.0kb downstream 14064 true Chr04: 46693831-46707894 Phaseolus vulgaris
Phvul.004G162700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46693831-46703830 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308559 5265 Fabidae View MSA
124071575 5270 Rosid View MSA
123738145 5271 Pentapetalae View MSA
122793617 5272 Eudicot View MSA
122049008 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.7517 0.0 263.414 High  
cufflinks 71.7571 0.0 278.509 High  
cufflinks 47.9432 0.0 134.112 High  
cufflinks 70.0455 0.0 266.999 High  
cufflinks 108.934 0.0 440.401 High High
cufflinks 42.5704 0.0 167.309 High Low
cufflinks 49.7443 0.0 186.359 High  
cufflinks 29.7378 0.0 120.948 High Low
cufflinks 87.4033 0.0 341.047 High  
cufflinks 96.2093 0.0 379.536 High High
cufflinks 71.3657 0.0 277.099 High  

0 Strain