Gene : Phvul.004G160800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10992//PTHR10992:SF841 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1650
Name:  ? Phvul.004G160800 Secondary Identifier:  ? PAC:37162469
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G160800 0.5kb upstream 0.5kb upstream 4044 true Chr04: 46507326-46511369 Phaseolus vulgaris
Phvul.004G160800 0.5kb upstream 0.5kb upstream 500 false Chr04: 46510870-46511369 Phaseolus vulgaris
Phvul.004G160800 0.5kb downstream 0.5kb downstream 4044 true Chr04: 46506826-46510869 Phaseolus vulgaris
Phvul.004G160800 0.5kb downstream 0.5kb downstream 500 false Chr04: 46506826-46507325 Phaseolus vulgaris
Phvul.004G160800 1.0kb upstream 1.0kb upstream 4544 true Chr04: 46507326-46511869 Phaseolus vulgaris
Phvul.004G160800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46510870-46511869 Phaseolus vulgaris
Phvul.004G160800 1.0kb downstream 1.0kb downstream 4544 true Chr04: 46506326-46510869 Phaseolus vulgaris
Phvul.004G160800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46506326-46507325 Phaseolus vulgaris
Phvul.004G160800 2.0kb upstream 2.0kb upstream 5544 true Chr04: 46507326-46512869 Phaseolus vulgaris
Phvul.004G160800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46510870-46512869 Phaseolus vulgaris
Phvul.004G160800 2.0kb downstream 2.0kb downstream 5544 true Chr04: 46505326-46510869 Phaseolus vulgaris
Phvul.004G160800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46505326-46507325 Phaseolus vulgaris
Phvul.004G160800 5.0kb upstream 5.0kb upstream 8544 true Chr04: 46507326-46515869 Phaseolus vulgaris
Phvul.004G160800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46510870-46515869 Phaseolus vulgaris
Phvul.004G160800 5.0kb downstream 5.0kb downstream 8544 true Chr04: 46502326-46510869 Phaseolus vulgaris
Phvul.004G160800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46502326-46507325 Phaseolus vulgaris
Phvul.004G160800 10.0kb upstream 10.0kb upstream 13544 true Chr04: 46507326-46520869 Phaseolus vulgaris
Phvul.004G160800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46510870-46520869 Phaseolus vulgaris
Phvul.004G160800 10.0kb downstream 10.0kb downstream 13544 true Chr04: 46497326-46510869 Phaseolus vulgaris
Phvul.004G160800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46497326-46507325 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307967 5265 Fabidae View MSA
124066716 5270 Rosid View MSA
123750652 5271 Pentapetalae View MSA
122793074 5272 Eudicot View MSA
122048522 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121350361 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.74639 0.0 35.8323    
cufflinks 1.30627 0.0 7.66959   Low
cufflinks 28.1354 0.0 92.8471    
cufflinks 35.0089 0.0 113.278 High High
cufflinks 1.87914 0.0 7.76788    
cufflinks 45.3082 0.0 145.737 High High
cufflinks 8.26114 0.0 34.9576    
cufflinks 12.5059 0.0 48.8866    
cufflinks 3.77063 0.0 12.9516    
cufflinks 0.331959 0.0 1.32401   Low
cufflinks 6.36389 0.0 23.7708    

0 Strain