Gene : Phvul.007G114100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15856//PTHR15856:SF29 - PHD FINGER PROTEIN 20-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1169
Name:  ? Phvul.007G114100 Secondary Identifier:  ? PAC:37164321
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G114100 0.5kb upstream 0.5kb upstream 5581 true Chr07: 18834999-18840579 Phaseolus vulgaris
Phvul.007G114100 0.5kb upstream 0.5kb upstream 500 false Chr07: 18834999-18835498 Phaseolus vulgaris
Phvul.007G114100 0.5kb downstream 0.5kb downstream 5581 true Chr07: 18835499-18841079 Phaseolus vulgaris
Phvul.007G114100 0.5kb downstream 0.5kb downstream 500 false Chr07: 18840580-18841079 Phaseolus vulgaris
Phvul.007G114100 1.0kb upstream 1.0kb upstream 6081 true Chr07: 18834499-18840579 Phaseolus vulgaris
Phvul.007G114100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 18834499-18835498 Phaseolus vulgaris
Phvul.007G114100 1.0kb downstream 1.0kb downstream 6081 true Chr07: 18835499-18841579 Phaseolus vulgaris
Phvul.007G114100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 18840580-18841579 Phaseolus vulgaris
Phvul.007G114100 2.0kb upstream 2.0kb upstream 7081 true Chr07: 18833499-18840579 Phaseolus vulgaris
Phvul.007G114100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 18833499-18835498 Phaseolus vulgaris
Phvul.007G114100 2.0kb downstream 2.0kb downstream 7081 true Chr07: 18835499-18842579 Phaseolus vulgaris
Phvul.007G114100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 18840580-18842579 Phaseolus vulgaris
Phvul.007G114100 5.0kb upstream 5.0kb upstream 10081 true Chr07: 18830499-18840579 Phaseolus vulgaris
Phvul.007G114100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 18830499-18835498 Phaseolus vulgaris
Phvul.007G114100 5.0kb downstream 5.0kb downstream 10081 true Chr07: 18835499-18845579 Phaseolus vulgaris
Phvul.007G114100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 18840580-18845579 Phaseolus vulgaris
Phvul.007G114100 10.0kb upstream 10.0kb upstream 15081 true Chr07: 18825499-18840579 Phaseolus vulgaris
Phvul.007G114100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 18825499-18835498 Phaseolus vulgaris
Phvul.007G114100 10.0kb downstream 10.0kb downstream 15081 true Chr07: 18835499-18850579 Phaseolus vulgaris
Phvul.007G114100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 18840580-18850579 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303151 5265 Fabidae View MSA
124069901 5270 Rosid View MSA
123741706 5271 Pentapetalae View MSA
122793317 5272 Eudicot View MSA
122047427 5273 Angiosperm View MSA
121310739 5274 Embryophyte View MSA
123348151 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.3318 0.0 54.2704    
cufflinks 18.3996 0.0 51.5377    
cufflinks 14.1213 0.0 39.4853   Low
cufflinks 12.5515 0.0 35.2398   Low
cufflinks 19.0749 0.0 53.5512    
cufflinks 14.4608 0.0 40.3928    
cufflinks 20.4086 0.0 69.7384    
cufflinks 20.8681 0.0 70.1069    
cufflinks 22.6281 0.0 63.8292    
cufflinks 31.7712 0.0 115.095   High
cufflinks 16.6617 0.0 46.5093    

0 Strain