Gene : Phvul.007G119178 P. vulgaris v2.1
Defline:  (1 of 17) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  1139
Name:  ? Phvul.007G119178 Secondary Identifier:  ? PAC:37167028
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G119178 0.5kb upstream 0.5kb upstream 2721 true Chr07: 17491323-17494043 Phaseolus vulgaris
Phvul.007G119178 0.5kb upstream 0.5kb upstream 500 false Chr07: 17493544-17494043 Phaseolus vulgaris
Phvul.007G119178 0.5kb downstream 0.5kb downstream 2721 true Chr07: 17490823-17493543 Phaseolus vulgaris
Phvul.007G119178 0.5kb downstream 0.5kb downstream 500 false Chr07: 17490823-17491322 Phaseolus vulgaris
Phvul.007G119178 1.0kb upstream 1.0kb upstream 3221 true Chr07: 17491323-17494543 Phaseolus vulgaris
Phvul.007G119178 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17493544-17494543 Phaseolus vulgaris
Phvul.007G119178 1.0kb downstream 1.0kb downstream 3221 true Chr07: 17490323-17493543 Phaseolus vulgaris
Phvul.007G119178 1.0kb downstream 1.0kb downstream 1000 false Chr07: 17490323-17491322 Phaseolus vulgaris
Phvul.007G119178 2.0kb upstream 2.0kb upstream 4221 true Chr07: 17491323-17495543 Phaseolus vulgaris
Phvul.007G119178 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17493544-17495543 Phaseolus vulgaris
Phvul.007G119178 2.0kb downstream 2.0kb downstream 4221 true Chr07: 17489323-17493543 Phaseolus vulgaris
Phvul.007G119178 2.0kb downstream 2.0kb downstream 2000 false Chr07: 17489323-17491322 Phaseolus vulgaris
Phvul.007G119178 5.0kb upstream 5.0kb upstream 7221 true Chr07: 17491323-17498543 Phaseolus vulgaris
Phvul.007G119178 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17493544-17498543 Phaseolus vulgaris
Phvul.007G119178 5.0kb downstream 5.0kb downstream 7221 true Chr07: 17486323-17493543 Phaseolus vulgaris
Phvul.007G119178 5.0kb downstream 5.0kb downstream 5000 false Chr07: 17486323-17491322 Phaseolus vulgaris
Phvul.007G119178 10.0kb upstream 10.0kb upstream 12221 true Chr07: 17491323-17503543 Phaseolus vulgaris
Phvul.007G119178 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17493544-17503543 Phaseolus vulgaris
Phvul.007G119178 10.0kb downstream 10.0kb downstream 12221 true Chr07: 17481323-17493543 Phaseolus vulgaris
Phvul.007G119178 10.0kb downstream 10.0kb downstream 10000 false Chr07: 17481323-17491322 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314397 5265 Fabidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 150.621 0.0 417.26 High  
cufflinks 474.952 0.0 1557.27 High  
cufflinks 4.23065 0.0 13.0004   Low
cufflinks 321.514 0.0 1000.7 High  
cufflinks 343.67 0.0 1079.61 High  
cufflinks 45.8804 0.0 118.617 High  
cufflinks 415.906 0.0 1343.96 High  
cufflinks 1216.5 0.0 5066.04 High High
cufflinks 201.301 0.0 580.023 High  
cufflinks 11.9025 0.0 33.0581   Low
cufflinks 554.541 0.0 1879.62 High  

0 Strain