Gene : Phvul.004G165200 P. vulgaris v2.1
Defline:  (1 of 1) K16584 - HAUS augmin-like complex subunit 1 (HAUS1) Genomic Order:  1695
Name:  ? Phvul.004G165200 Secondary Identifier:  ? PAC:37162189
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G165200 0.5kb upstream 0.5kb upstream 4166 true Chr04: 46931048-46935213 Phaseolus vulgaris
Phvul.004G165200 0.5kb upstream 0.5kb upstream 500 false Chr04: 46934714-46935213 Phaseolus vulgaris
Phvul.004G165200 0.5kb downstream 0.5kb downstream 4166 true Chr04: 46930548-46934713 Phaseolus vulgaris
Phvul.004G165200 0.5kb downstream 0.5kb downstream 500 false Chr04: 46930548-46931047 Phaseolus vulgaris
Phvul.004G165200 1.0kb upstream 1.0kb upstream 4666 true Chr04: 46931048-46935713 Phaseolus vulgaris
Phvul.004G165200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46934714-46935713 Phaseolus vulgaris
Phvul.004G165200 1.0kb downstream 1.0kb downstream 4666 true Chr04: 46930048-46934713 Phaseolus vulgaris
Phvul.004G165200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46930048-46931047 Phaseolus vulgaris
Phvul.004G165200 2.0kb upstream 2.0kb upstream 5666 true Chr04: 46931048-46936713 Phaseolus vulgaris
Phvul.004G165200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46934714-46936713 Phaseolus vulgaris
Phvul.004G165200 2.0kb downstream 2.0kb downstream 5666 true Chr04: 46929048-46934713 Phaseolus vulgaris
Phvul.004G165200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46929048-46931047 Phaseolus vulgaris
Phvul.004G165200 5.0kb upstream 5.0kb upstream 8666 true Chr04: 46931048-46939713 Phaseolus vulgaris
Phvul.004G165200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46934714-46939713 Phaseolus vulgaris
Phvul.004G165200 5.0kb downstream 5.0kb downstream 8666 true Chr04: 46926048-46934713 Phaseolus vulgaris
Phvul.004G165200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46926048-46931047 Phaseolus vulgaris
Phvul.004G165200 10.0kb upstream 10.0kb upstream 13666 true Chr04: 46931048-46944713 Phaseolus vulgaris
Phvul.004G165200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46934714-46944713 Phaseolus vulgaris
Phvul.004G165200 10.0kb downstream 10.0kb downstream 13666 true Chr04: 46921048-46934713 Phaseolus vulgaris
Phvul.004G165200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46921048-46931047 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299316 5265 Fabidae View MSA
124064137 5270 Rosid View MSA
123746699 5271 Pentapetalae View MSA
122792649 5272 Eudicot View MSA
122046982 5273 Angiosperm View MSA
121344598 5274 Embryophyte View MSA
123426865 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.90285 0.0 14.3548    
cufflinks 9.33509 0.0 25.6501   High
cufflinks 7.1283 0.0 20.0957    
cufflinks 8.1577 0.0 22.8207    
cufflinks 7.33043 0.0 20.7117    
cufflinks 6.45601 0.0 18.3308    
cufflinks 5.80141 0.0 16.6047    
cufflinks 5.82365 0.0 16.6383    
cufflinks 6.04323 0.0 17.2453    
cufflinks 2.25422 0.0 7.21761   Low
cufflinks 9.22849 0.0 25.4357   High

0 Strain