Gene : Phvul.007G121090 P. vulgaris v2.1
Defline:  (1 of 3) PTHR35708:SF1 - GB Genomic Order:  1143
Name:  ? Phvul.007G121090 Secondary Identifier:  ? PAC:37167029
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G121090 0.5kb upstream 0.5kb upstream 1526 true Chr07: 17619917-17621442 Phaseolus vulgaris
Phvul.007G121090 0.5kb upstream 0.5kb upstream 500 false Chr07: 17619917-17620416 Phaseolus vulgaris
Phvul.007G121090 0.5kb downstream 0.5kb downstream 1526 true Chr07: 17620417-17621942 Phaseolus vulgaris
Phvul.007G121090 0.5kb downstream 0.5kb downstream 500 false Chr07: 17621443-17621942 Phaseolus vulgaris
Phvul.007G121090 1.0kb upstream 1.0kb upstream 2026 true Chr07: 17619417-17621442 Phaseolus vulgaris
Phvul.007G121090 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17619417-17620416 Phaseolus vulgaris
Phvul.007G121090 1.0kb downstream 1.0kb downstream 2026 true Chr07: 17620417-17622442 Phaseolus vulgaris
Phvul.007G121090 1.0kb downstream 1.0kb downstream 1000 false Chr07: 17621443-17622442 Phaseolus vulgaris
Phvul.007G121090 2.0kb upstream 2.0kb upstream 3026 true Chr07: 17618417-17621442 Phaseolus vulgaris
Phvul.007G121090 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17618417-17620416 Phaseolus vulgaris
Phvul.007G121090 2.0kb downstream 2.0kb downstream 3026 true Chr07: 17620417-17623442 Phaseolus vulgaris
Phvul.007G121090 2.0kb downstream 2.0kb downstream 2000 false Chr07: 17621443-17623442 Phaseolus vulgaris
Phvul.007G121090 5.0kb upstream 5.0kb upstream 6026 true Chr07: 17615417-17621442 Phaseolus vulgaris
Phvul.007G121090 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17615417-17620416 Phaseolus vulgaris
Phvul.007G121090 5.0kb downstream 5.0kb downstream 6026 true Chr07: 17620417-17626442 Phaseolus vulgaris
Phvul.007G121090 5.0kb downstream 5.0kb downstream 5000 false Chr07: 17621443-17626442 Phaseolus vulgaris
Phvul.007G121090 10.0kb upstream 10.0kb upstream 11026 true Chr07: 17610417-17621442 Phaseolus vulgaris
Phvul.007G121090 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17610417-17620416 Phaseolus vulgaris
Phvul.007G121090 10.0kb downstream 10.0kb downstream 11026 true Chr07: 17620417-17631442 Phaseolus vulgaris
Phvul.007G121090 10.0kb downstream 10.0kb downstream 10000 false Chr07: 17621443-17631442 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302802 5265 Fabidae View MSA
124070540 5270 Rosid View MSA
123748172 5271 Pentapetalae View MSA
122794330 5272 Eudicot View MSA
122044423 5273 Angiosperm View MSA
121310293 5274 Embryophyte View MSA
123347819 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.517735 0.0 1.99733   Low
cufflinks 1.21624 0.0 4.36263    
cufflinks 0.386795 0.0 1.5169 Low Low
cufflinks 1.27594 0.0 4.58516    
cufflinks 3.2829 0.0 10.6067   High
cufflinks 0.819603 0.0 3.03925    
cufflinks 2.09815 0.0 7.07641    
cufflinks 0.597369 0.0 2.26957    
cufflinks 3.28627 0.0 10.5411   High
cufflinks 0.813207 0.0 3.0329    
cufflinks 4.09645 0.0 12.9165   High

0 Strain