Gene : Phvul.007G118500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12506//PTHR12506:SF25 - PROTEIN PHOSPHATASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  1136
Name:  ? Phvul.007G118500 Secondary Identifier:  ? PAC:37166428
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G118500 0.5kb upstream 0.5kb upstream 5783 true Chr07: 17294297-17300079 Phaseolus vulgaris
Phvul.007G118500 0.5kb upstream 0.5kb upstream 500 false Chr07: 17294297-17294796 Phaseolus vulgaris
Phvul.007G118500 0.5kb downstream 0.5kb downstream 5783 true Chr07: 17294797-17300579 Phaseolus vulgaris
Phvul.007G118500 0.5kb downstream 0.5kb downstream 500 false Chr07: 17300080-17300579 Phaseolus vulgaris
Phvul.007G118500 1.0kb upstream 1.0kb upstream 6283 true Chr07: 17293797-17300079 Phaseolus vulgaris
Phvul.007G118500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17293797-17294796 Phaseolus vulgaris
Phvul.007G118500 1.0kb downstream 1.0kb downstream 6283 true Chr07: 17294797-17301079 Phaseolus vulgaris
Phvul.007G118500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 17300080-17301079 Phaseolus vulgaris
Phvul.007G118500 2.0kb upstream 2.0kb upstream 7283 true Chr07: 17292797-17300079 Phaseolus vulgaris
Phvul.007G118500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17292797-17294796 Phaseolus vulgaris
Phvul.007G118500 2.0kb downstream 2.0kb downstream 7283 true Chr07: 17294797-17302079 Phaseolus vulgaris
Phvul.007G118500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 17300080-17302079 Phaseolus vulgaris
Phvul.007G118500 5.0kb upstream 5.0kb upstream 10283 true Chr07: 17289797-17300079 Phaseolus vulgaris
Phvul.007G118500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17289797-17294796 Phaseolus vulgaris
Phvul.007G118500 5.0kb downstream 5.0kb downstream 10283 true Chr07: 17294797-17305079 Phaseolus vulgaris
Phvul.007G118500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 17300080-17305079 Phaseolus vulgaris
Phvul.007G118500 10.0kb upstream 10.0kb upstream 15283 true Chr07: 17284797-17300079 Phaseolus vulgaris
Phvul.007G118500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17284797-17294796 Phaseolus vulgaris
Phvul.007G118500 10.0kb downstream 10.0kb downstream 15283 true Chr07: 17294797-17310079 Phaseolus vulgaris
Phvul.007G118500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 17300080-17310079 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253907 5265 Fabidae View MSA
123996302 5270 Rosid View MSA
123742436 5271 Pentapetalae View MSA
122788272 5272 Eudicot View MSA
122047416 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0735 0.0 41.7295    
cufflinks 15.5078 0.0 40.2718    
cufflinks 30.1547 0.0 78.4348   High
cufflinks 20.729 0.0 53.6006    
cufflinks 18.7776 0.0 48.5995    
cufflinks 23.8125 0.0 61.5855   High
cufflinks 16.7716 0.0 43.4579    
cufflinks 16.7254 0.0 43.3113    
cufflinks 14.5923 0.0 37.9739    
cufflinks 13.2562 0.0 34.6387   Low
cufflinks 22.1863 0.0 57.3475    

0 Strain