Gene : Phvul.004G168100 P. vulgaris v2.1
Defline:  (1 of 1) K02357 - elongation factor Ts (tsf, TSFM) Genomic Order:  1727
Name:  ? Phvul.004G168100 Secondary Identifier:  ? PAC:37163564
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G168100 0.5kb upstream 0.5kb upstream 7068 true Chr04: 47174475-47181542 Phaseolus vulgaris
Phvul.004G168100 0.5kb upstream 0.5kb upstream 500 false Chr04: 47181043-47181542 Phaseolus vulgaris
Phvul.004G168100 0.5kb downstream 0.5kb downstream 7068 true Chr04: 47173975-47181042 Phaseolus vulgaris
Phvul.004G168100 0.5kb downstream 0.5kb downstream 500 false Chr04: 47173975-47174474 Phaseolus vulgaris
Phvul.004G168100 1.0kb upstream 1.0kb upstream 7568 true Chr04: 47174475-47182042 Phaseolus vulgaris
Phvul.004G168100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47181043-47182042 Phaseolus vulgaris
Phvul.004G168100 1.0kb downstream 1.0kb downstream 7568 true Chr04: 47173475-47181042 Phaseolus vulgaris
Phvul.004G168100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47173475-47174474 Phaseolus vulgaris
Phvul.004G168100 2.0kb upstream 2.0kb upstream 8568 true Chr04: 47174475-47183042 Phaseolus vulgaris
Phvul.004G168100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47181043-47183042 Phaseolus vulgaris
Phvul.004G168100 2.0kb downstream 2.0kb downstream 8568 true Chr04: 47172475-47181042 Phaseolus vulgaris
Phvul.004G168100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47172475-47174474 Phaseolus vulgaris
Phvul.004G168100 5.0kb upstream 5.0kb upstream 11568 true Chr04: 47174475-47186042 Phaseolus vulgaris
Phvul.004G168100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47181043-47186042 Phaseolus vulgaris
Phvul.004G168100 5.0kb downstream 5.0kb downstream 11568 true Chr04: 47169475-47181042 Phaseolus vulgaris
Phvul.004G168100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47169475-47174474 Phaseolus vulgaris
Phvul.004G168100 10.0kb upstream 10.0kb upstream 16568 true Chr04: 47174475-47191042 Phaseolus vulgaris
Phvul.004G168100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47181043-47191042 Phaseolus vulgaris
Phvul.004G168100 10.0kb downstream 10.0kb downstream 16568 true Chr04: 47164475-47181042 Phaseolus vulgaris
Phvul.004G168100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47164475-47174474 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299207 5265 Fabidae View MSA
124065637 5270 Rosid View MSA
123739770 5271 Pentapetalae View MSA
122794844 5272 Eudicot View MSA
122043954 5273 Angiosperm View MSA
121346485 5274 Embryophyte View MSA
123425241 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.05112 0.0 19.8929    
cufflinks 26.0183 0.0 80.2104    
cufflinks 218.822 0.0 1527.62 High High
cufflinks 5.28246 0.0 15.4491    
cufflinks 14.829 0.0 47.4372    
cufflinks 111.844 0.0 534.931 High High
cufflinks 3.89416 0.0 11.7344    
cufflinks 4.74814 0.0 13.8253    
cufflinks 3.58194 0.0 12.5719   Low
cufflinks 29.3855 0.0 105.319    
cufflinks 7.96634 0.0 22.3373    

0 Strain