Gene : Phvul.004G165700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23238 - RNA BINDING PROTEIN Genomic Order:  1701
Name:  ? Phvul.004G165700 Secondary Identifier:  ? PAC:37162874
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G165700 0.5kb upstream 0.5kb upstream 5267 true Chr04: 46972263-46977529 Phaseolus vulgaris
Phvul.004G165700 0.5kb upstream 0.5kb upstream 500 false Chr04: 46977030-46977529 Phaseolus vulgaris
Phvul.004G165700 0.5kb downstream 0.5kb downstream 5267 true Chr04: 46971763-46977029 Phaseolus vulgaris
Phvul.004G165700 0.5kb downstream 0.5kb downstream 500 false Chr04: 46971763-46972262 Phaseolus vulgaris
Phvul.004G165700 1.0kb upstream 1.0kb upstream 5767 true Chr04: 46972263-46978029 Phaseolus vulgaris
Phvul.004G165700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46977030-46978029 Phaseolus vulgaris
Phvul.004G165700 1.0kb downstream 1.0kb downstream 5767 true Chr04: 46971263-46977029 Phaseolus vulgaris
Phvul.004G165700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46971263-46972262 Phaseolus vulgaris
Phvul.004G165700 2.0kb upstream 2.0kb upstream 6767 true Chr04: 46972263-46979029 Phaseolus vulgaris
Phvul.004G165700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46977030-46979029 Phaseolus vulgaris
Phvul.004G165700 2.0kb downstream 2.0kb downstream 6767 true Chr04: 46970263-46977029 Phaseolus vulgaris
Phvul.004G165700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46970263-46972262 Phaseolus vulgaris
Phvul.004G165700 5.0kb upstream 5.0kb upstream 9767 true Chr04: 46972263-46982029 Phaseolus vulgaris
Phvul.004G165700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46977030-46982029 Phaseolus vulgaris
Phvul.004G165700 5.0kb downstream 5.0kb downstream 9767 true Chr04: 46967263-46977029 Phaseolus vulgaris
Phvul.004G165700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46967263-46972262 Phaseolus vulgaris
Phvul.004G165700 10.0kb upstream 10.0kb upstream 14767 true Chr04: 46972263-46987029 Phaseolus vulgaris
Phvul.004G165700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46977030-46987029 Phaseolus vulgaris
Phvul.004G165700 10.0kb downstream 10.0kb downstream 14767 true Chr04: 46962263-46977029 Phaseolus vulgaris
Phvul.004G165700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46962263-46972262 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040867 5273 Angiosperm View MSA
122306595 5265 Fabidae View MSA
124065118 5270 Rosid View MSA
123752597 5271 Pentapetalae View MSA
122794158 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121350516 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.6436 0.0 35.8571   Low
cufflinks 21.2945 0.0 55.1112    
cufflinks 16.7977 0.0 43.7879    
cufflinks 17.1624 0.0 44.6639    
cufflinks 24.2567 0.0 62.7003   High
cufflinks 14.1783 0.0 37.1967   Low
cufflinks 19.3334 0.0 50.0449    
cufflinks 22.5275 0.0 58.2392   High
cufflinks 18.5234 0.0 48.0259    
cufflinks 20.2373 0.0 52.429    
cufflinks 17.778 0.0 46.1665    

0 Strain