Gene : Phvul.004G169700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11062:SF77 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  1740
Name:  ? Phvul.004G169700 Secondary Identifier:  ? PAC:37162407
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5980 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G169700 0.5kb upstream 0.5kb upstream 3850 true Chr04: 47300267-47304116 Phaseolus vulgaris
Phvul.004G169700 0.5kb upstream 0.5kb upstream 500 false Chr04: 47300267-47300766 Phaseolus vulgaris
Phvul.004G169700 0.5kb downstream 0.5kb downstream 3850 true Chr04: 47300767-47304616 Phaseolus vulgaris
Phvul.004G169700 0.5kb downstream 0.5kb downstream 500 false Chr04: 47304117-47304616 Phaseolus vulgaris
Phvul.004G169700 1.0kb upstream 1.0kb upstream 4350 true Chr04: 47299767-47304116 Phaseolus vulgaris
Phvul.004G169700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47299767-47300766 Phaseolus vulgaris
Phvul.004G169700 1.0kb downstream 1.0kb downstream 4350 true Chr04: 47300767-47305116 Phaseolus vulgaris
Phvul.004G169700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47304117-47305116 Phaseolus vulgaris
Phvul.004G169700 2.0kb upstream 2.0kb upstream 5350 true Chr04: 47298767-47304116 Phaseolus vulgaris
Phvul.004G169700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47298767-47300766 Phaseolus vulgaris
Phvul.004G169700 2.0kb downstream 2.0kb downstream 5350 true Chr04: 47300767-47306116 Phaseolus vulgaris
Phvul.004G169700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47304117-47306116 Phaseolus vulgaris
Phvul.004G169700 5.0kb upstream 5.0kb upstream 8350 true Chr04: 47295767-47304116 Phaseolus vulgaris
Phvul.004G169700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47295767-47300766 Phaseolus vulgaris
Phvul.004G169700 5.0kb downstream 5.0kb downstream 8350 true Chr04: 47300767-47309116 Phaseolus vulgaris
Phvul.004G169700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47304117-47309116 Phaseolus vulgaris
Phvul.004G169700 10.0kb upstream 10.0kb upstream 13350 true Chr04: 47290767-47304116 Phaseolus vulgaris
Phvul.004G169700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47290767-47300766 Phaseolus vulgaris
Phvul.004G169700 10.0kb downstream 10.0kb downstream 13350 true Chr04: 47300767-47314116 Phaseolus vulgaris
Phvul.004G169700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47304117-47314116 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
122308946 5265 Fabidae View MSA
124069541 5270 Rosid View MSA
123742009 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.04944 0.0 3.49426   Low
cufflinks 4.12828 0.0 11.7913   High
cufflinks 3.71349 0.0 10.6786    
cufflinks 2.14337 0.0 6.66542    
cufflinks 2.5322 0.0 7.71477    
cufflinks 4.60612 0.0 12.9988   High
cufflinks 1.84857 0.0 5.78744    
cufflinks 1.82257 0.0 5.66821    
cufflinks 1.26788 0.0 4.15431   Low
cufflinks 4.19967 0.0 11.9897   High
cufflinks 2.69313 0.0 8.13149    

0 Strain