Gene : Phvul.007G134000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Genomic Order:  1208
Name:  ? Phvul.007G134000 Secondary Identifier:  ? PAC:37166390
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G134000 0.5kb upstream 0.5kb upstream 6493 true Chr07: 20991052-20997544 Phaseolus vulgaris
Phvul.007G134000 0.5kb upstream 0.5kb upstream 500 false Chr07: 20991052-20991551 Phaseolus vulgaris
Phvul.007G134000 0.5kb downstream 0.5kb downstream 6493 true Chr07: 20991552-20998044 Phaseolus vulgaris
Phvul.007G134000 0.5kb downstream 0.5kb downstream 500 false Chr07: 20997545-20998044 Phaseolus vulgaris
Phvul.007G134000 1.0kb upstream 1.0kb upstream 6993 true Chr07: 20990552-20997544 Phaseolus vulgaris
Phvul.007G134000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 20990552-20991551 Phaseolus vulgaris
Phvul.007G134000 1.0kb downstream 1.0kb downstream 6993 true Chr07: 20991552-20998544 Phaseolus vulgaris
Phvul.007G134000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 20997545-20998544 Phaseolus vulgaris
Phvul.007G134000 2.0kb upstream 2.0kb upstream 7993 true Chr07: 20989552-20997544 Phaseolus vulgaris
Phvul.007G134000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 20989552-20991551 Phaseolus vulgaris
Phvul.007G134000 2.0kb downstream 2.0kb downstream 7993 true Chr07: 20991552-20999544 Phaseolus vulgaris
Phvul.007G134000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 20997545-20999544 Phaseolus vulgaris
Phvul.007G134000 5.0kb upstream 5.0kb upstream 10993 true Chr07: 20986552-20997544 Phaseolus vulgaris
Phvul.007G134000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 20986552-20991551 Phaseolus vulgaris
Phvul.007G134000 5.0kb downstream 5.0kb downstream 10993 true Chr07: 20991552-21002544 Phaseolus vulgaris
Phvul.007G134000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 20997545-21002544 Phaseolus vulgaris
Phvul.007G134000 10.0kb upstream 10.0kb upstream 15993 true Chr07: 20981552-20997544 Phaseolus vulgaris
Phvul.007G134000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 20981552-20991551 Phaseolus vulgaris
Phvul.007G134000 10.0kb downstream 10.0kb downstream 15993 true Chr07: 20991552-21007544 Phaseolus vulgaris
Phvul.007G134000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 20997545-21007544 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307934 5265 Fabidae View MSA
124066236 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7248 0.0 35.029    
cufflinks 17.0199 0.0 45.5402   High
cufflinks 8.16301 0.0 23.3472    
cufflinks 20.2514 0.0 53.7084   High
cufflinks 12.4092 0.0 34.2065    
cufflinks 10.9376 0.0 30.3877    
cufflinks 7.50076 0.0 21.4777   Low
cufflinks 11.9487 0.0 32.7521    
cufflinks 7.82553 0.0 22.3411    
cufflinks 6.48492 0.0 18.9836   Low
cufflinks 15.9005 0.0 42.7972    

0 Strain