Gene : Phvul.004G170200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33265:SF8 - F5F19.20 PROTEIN Genomic Order:  1745
Name:  ? Phvul.004G170200 Secondary Identifier:  ? PAC:37162717
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G170200 0.5kb upstream 0.5kb upstream 1403 true Chr04: 47379649-47381051 Phaseolus vulgaris
Phvul.004G170200 0.5kb upstream 0.5kb upstream 500 false Chr04: 47379649-47380148 Phaseolus vulgaris
Phvul.004G170200 0.5kb downstream 0.5kb downstream 1403 true Chr04: 47380149-47381551 Phaseolus vulgaris
Phvul.004G170200 0.5kb downstream 0.5kb downstream 500 false Chr04: 47381052-47381551 Phaseolus vulgaris
Phvul.004G170200 1.0kb upstream 1.0kb upstream 1903 true Chr04: 47379149-47381051 Phaseolus vulgaris
Phvul.004G170200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47379149-47380148 Phaseolus vulgaris
Phvul.004G170200 1.0kb downstream 1.0kb downstream 1903 true Chr04: 47380149-47382051 Phaseolus vulgaris
Phvul.004G170200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47381052-47382051 Phaseolus vulgaris
Phvul.004G170200 2.0kb upstream 2.0kb upstream 2903 true Chr04: 47378149-47381051 Phaseolus vulgaris
Phvul.004G170200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47378149-47380148 Phaseolus vulgaris
Phvul.004G170200 2.0kb downstream 2.0kb downstream 2903 true Chr04: 47380149-47383051 Phaseolus vulgaris
Phvul.004G170200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47381052-47383051 Phaseolus vulgaris
Phvul.004G170200 5.0kb upstream 5.0kb upstream 5903 true Chr04: 47375149-47381051 Phaseolus vulgaris
Phvul.004G170200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47375149-47380148 Phaseolus vulgaris
Phvul.004G170200 5.0kb downstream 5.0kb downstream 5903 true Chr04: 47380149-47386051 Phaseolus vulgaris
Phvul.004G170200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47381052-47386051 Phaseolus vulgaris
Phvul.004G170200 10.0kb upstream 10.0kb upstream 10903 true Chr04: 47370149-47381051 Phaseolus vulgaris
Phvul.004G170200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47370149-47380148 Phaseolus vulgaris
Phvul.004G170200 10.0kb downstream 10.0kb downstream 10903 true Chr04: 47380149-47391051 Phaseolus vulgaris
Phvul.004G170200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47381052-47391051 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313783 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.3632 0.0 49.6821    
cufflinks 14.7037 0.0 40.6571    
cufflinks 26.1674 0.0 69.258   High
cufflinks 10.7069 0.0 30.0534    
cufflinks 11.3947 0.0 31.9958    
cufflinks 12.1419 0.0 34.1501    
cufflinks 6.87643 0.0 20.2601    
cufflinks 5.54699 0.0 16.9475   Low
cufflinks 4.07659 0.0 12.7345   Low
cufflinks 16.15 0.0 44.2826    
cufflinks 6.32728 0.0 18.9043    

0 Strain