Gene : Phvul.004G168900 P. vulgaris v2.1
Genomic Order:  1732 Name:  ? Phvul.004G168900
Secondary Identifier:  ? PAC:37163529
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G168900 0.5kb upstream 0.5kb upstream 1106 true Chr04: 47236808-47237913 Phaseolus vulgaris
Phvul.004G168900 0.5kb upstream 0.5kb upstream 500 false Chr04: 47237414-47237913 Phaseolus vulgaris
Phvul.004G168900 0.5kb downstream 0.5kb downstream 1106 true Chr04: 47236308-47237413 Phaseolus vulgaris
Phvul.004G168900 0.5kb downstream 0.5kb downstream 500 false Chr04: 47236308-47236807 Phaseolus vulgaris
Phvul.004G168900 1.0kb upstream 1.0kb upstream 1606 true Chr04: 47236808-47238413 Phaseolus vulgaris
Phvul.004G168900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47237414-47238413 Phaseolus vulgaris
Phvul.004G168900 1.0kb downstream 1.0kb downstream 1606 true Chr04: 47235808-47237413 Phaseolus vulgaris
Phvul.004G168900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47235808-47236807 Phaseolus vulgaris
Phvul.004G168900 2.0kb upstream 2.0kb upstream 2606 true Chr04: 47236808-47239413 Phaseolus vulgaris
Phvul.004G168900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47237414-47239413 Phaseolus vulgaris
Phvul.004G168900 2.0kb downstream 2.0kb downstream 2606 true Chr04: 47234808-47237413 Phaseolus vulgaris
Phvul.004G168900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47234808-47236807 Phaseolus vulgaris
Phvul.004G168900 5.0kb upstream 5.0kb upstream 5606 true Chr04: 47236808-47242413 Phaseolus vulgaris
Phvul.004G168900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47237414-47242413 Phaseolus vulgaris
Phvul.004G168900 5.0kb downstream 5.0kb downstream 5606 true Chr04: 47231808-47237413 Phaseolus vulgaris
Phvul.004G168900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47231808-47236807 Phaseolus vulgaris
Phvul.004G168900 10.0kb upstream 10.0kb upstream 10606 true Chr04: 47236808-47247413 Phaseolus vulgaris
Phvul.004G168900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47237414-47247413 Phaseolus vulgaris
Phvul.004G168900 10.0kb downstream 10.0kb downstream 10606 true Chr04: 47226808-47237413 Phaseolus vulgaris
Phvul.004G168900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47226808-47236807 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792245 5273 Angiosperm View MSA
122298550 5265 Fabidae View MSA
124038157 5270 Rosid View MSA
123610673 5271 Pentapetalae View MSA
122797072 5272 Eudicot View MSA
121063488 5274 Embryophyte View MSA
123103232 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.708398 0.0 2.83576    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.84973 0.0 30.8023   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.08014 0.0 10.918    
cufflinks 0.378967 0.0 1.59788 Low Low
cufflinks 0.826395 0.0 3.2704    
cufflinks 0.614489 0.0 2.49545    
cufflinks 24.7279 0.0 69.7469   High

0 Strain