Gene : Phvul.007G129400 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31100:SF3 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 19-RELATED Genomic Order:  1101
Name:  ? Phvul.007G129400 Secondary Identifier:  ? PAC:37164576
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G129400 0.5kb upstream 0.5kb upstream 1554 true Chr07: 14122141-14123694 Phaseolus vulgaris
Phvul.007G129400 0.5kb upstream 0.5kb upstream 500 false Chr07: 14123195-14123694 Phaseolus vulgaris
Phvul.007G129400 0.5kb downstream 0.5kb downstream 1554 true Chr07: 14121641-14123194 Phaseolus vulgaris
Phvul.007G129400 0.5kb downstream 0.5kb downstream 500 false Chr07: 14121641-14122140 Phaseolus vulgaris
Phvul.007G129400 1.0kb upstream 1.0kb upstream 2054 true Chr07: 14122141-14124194 Phaseolus vulgaris
Phvul.007G129400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 14123195-14124194 Phaseolus vulgaris
Phvul.007G129400 1.0kb downstream 1.0kb downstream 2054 true Chr07: 14121141-14123194 Phaseolus vulgaris
Phvul.007G129400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 14121141-14122140 Phaseolus vulgaris
Phvul.007G129400 2.0kb upstream 2.0kb upstream 3054 true Chr07: 14122141-14125194 Phaseolus vulgaris
Phvul.007G129400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 14123195-14125194 Phaseolus vulgaris
Phvul.007G129400 2.0kb downstream 2.0kb downstream 3054 true Chr07: 14120141-14123194 Phaseolus vulgaris
Phvul.007G129400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 14120141-14122140 Phaseolus vulgaris
Phvul.007G129400 5.0kb upstream 5.0kb upstream 6054 true Chr07: 14122141-14128194 Phaseolus vulgaris
Phvul.007G129400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 14123195-14128194 Phaseolus vulgaris
Phvul.007G129400 5.0kb downstream 5.0kb downstream 6054 true Chr07: 14117141-14123194 Phaseolus vulgaris
Phvul.007G129400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 14117141-14122140 Phaseolus vulgaris
Phvul.007G129400 10.0kb upstream 10.0kb upstream 11054 true Chr07: 14122141-14133194 Phaseolus vulgaris
Phvul.007G129400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 14123195-14133194 Phaseolus vulgaris
Phvul.007G129400 10.0kb downstream 10.0kb downstream 11054 true Chr07: 14112141-14123194 Phaseolus vulgaris
Phvul.007G129400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 14112141-14122140 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297655 5265 Fabidae View MSA
124071129 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0594611 0.0 0.273693 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.75535 0.0 14.4005    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 35.4343 0.0 91.6084 High  
cufflinks 36.4421 0.0 94.2179 High  
cufflinks 20.0803 0.0 52.8747    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.18762 0.0 4.19377    

0 Strain