Gene : Phvul.004G153014 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10682:SF10 - FI03258P Genomic Order:  1559
Name:  ? Phvul.004G153014 Secondary Identifier:  ? PAC:37163719
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G153014 0.5kb upstream 0.5kb upstream 6034 true Chr04: 45548664-45554697 Phaseolus vulgaris
Phvul.004G153014 0.5kb upstream 0.5kb upstream 500 false Chr04: 45548664-45549163 Phaseolus vulgaris
Phvul.004G153014 0.5kb downstream 0.5kb downstream 6034 true Chr04: 45549164-45555197 Phaseolus vulgaris
Phvul.004G153014 0.5kb downstream 0.5kb downstream 500 false Chr04: 45554698-45555197 Phaseolus vulgaris
Phvul.004G153014 1.0kb upstream 1.0kb upstream 6534 true Chr04: 45548164-45554697 Phaseolus vulgaris
Phvul.004G153014 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45548164-45549163 Phaseolus vulgaris
Phvul.004G153014 1.0kb downstream 1.0kb downstream 6534 true Chr04: 45549164-45555697 Phaseolus vulgaris
Phvul.004G153014 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45554698-45555697 Phaseolus vulgaris
Phvul.004G153014 2.0kb upstream 2.0kb upstream 7534 true Chr04: 45547164-45554697 Phaseolus vulgaris
Phvul.004G153014 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45547164-45549163 Phaseolus vulgaris
Phvul.004G153014 2.0kb downstream 2.0kb downstream 7534 true Chr04: 45549164-45556697 Phaseolus vulgaris
Phvul.004G153014 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45554698-45556697 Phaseolus vulgaris
Phvul.004G153014 5.0kb upstream 5.0kb upstream 10534 true Chr04: 45544164-45554697 Phaseolus vulgaris
Phvul.004G153014 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45544164-45549163 Phaseolus vulgaris
Phvul.004G153014 5.0kb downstream 5.0kb downstream 10534 true Chr04: 45549164-45559697 Phaseolus vulgaris
Phvul.004G153014 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45554698-45559697 Phaseolus vulgaris
Phvul.004G153014 10.0kb upstream 10.0kb upstream 15534 true Chr04: 45539164-45554697 Phaseolus vulgaris
Phvul.004G153014 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45539164-45549163 Phaseolus vulgaris
Phvul.004G153014 10.0kb downstream 10.0kb downstream 15534 true Chr04: 45549164-45564697 Phaseolus vulgaris
Phvul.004G153014 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45554698-45564697 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311192 5265 Fabidae View MSA
124068405 5270 Rosid View MSA
123750004 5271 Pentapetalae View MSA
122790676 5272 Eudicot View MSA
122041871 5273 Angiosperm View MSA
123429108 5275 Viridiplantae View MSA
121348362 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5526 0.0 32.7369    
cufflinks 12.2318 0.0 31.9457    
cufflinks 20.2337 0.0 52.3082   High
cufflinks 6.62485 0.0 18.1629   Low
cufflinks 12.4213 0.0 32.5402    
cufflinks 14.3572 0.0 37.2667    
cufflinks 11.8565 0.0 31.0146    
cufflinks 12.5296 0.0 32.6375    
cufflinks 10.6995 0.0 28.1603    
cufflinks 20.9235 0.0 54.0883   High
cufflinks 12.2381 0.0 32.0295    

0 Strain