Gene : Phvul.007G100400 P. vulgaris v2.1
Defline:  (1 of 3) K12736 - peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8] (PPWD1) Genomic Order:  1015
Name:  ? Phvul.007G100400 Secondary Identifier:  ? PAC:37166444
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G100400 0.5kb upstream 0.5kb upstream 5578 true Chr07: 11083815-11089392 Phaseolus vulgaris
Phvul.007G100400 0.5kb upstream 0.5kb upstream 500 false Chr07: 11088893-11089392 Phaseolus vulgaris
Phvul.007G100400 0.5kb downstream 0.5kb downstream 5578 true Chr07: 11083315-11088892 Phaseolus vulgaris
Phvul.007G100400 0.5kb downstream 0.5kb downstream 500 false Chr07: 11083315-11083814 Phaseolus vulgaris
Phvul.007G100400 1.0kb upstream 1.0kb upstream 6078 true Chr07: 11083815-11089892 Phaseolus vulgaris
Phvul.007G100400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 11088893-11089892 Phaseolus vulgaris
Phvul.007G100400 1.0kb downstream 1.0kb downstream 6078 true Chr07: 11082815-11088892 Phaseolus vulgaris
Phvul.007G100400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 11082815-11083814 Phaseolus vulgaris
Phvul.007G100400 2.0kb upstream 2.0kb upstream 7078 true Chr07: 11083815-11090892 Phaseolus vulgaris
Phvul.007G100400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 11088893-11090892 Phaseolus vulgaris
Phvul.007G100400 2.0kb downstream 2.0kb downstream 7078 true Chr07: 11081815-11088892 Phaseolus vulgaris
Phvul.007G100400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 11081815-11083814 Phaseolus vulgaris
Phvul.007G100400 5.0kb upstream 5.0kb upstream 10078 true Chr07: 11083815-11093892 Phaseolus vulgaris
Phvul.007G100400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 11088893-11093892 Phaseolus vulgaris
Phvul.007G100400 5.0kb downstream 5.0kb downstream 10078 true Chr07: 11078815-11088892 Phaseolus vulgaris
Phvul.007G100400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 11078815-11083814 Phaseolus vulgaris
Phvul.007G100400 10.0kb upstream 10.0kb upstream 15078 true Chr07: 11083815-11098892 Phaseolus vulgaris
Phvul.007G100400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 11088893-11098892 Phaseolus vulgaris
Phvul.007G100400 10.0kb downstream 10.0kb downstream 15078 true Chr07: 11073815-11088892 Phaseolus vulgaris
Phvul.007G100400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 11073815-11083814 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301265 5265 Fabidae View MSA
124066155 5270 Rosid View MSA
123744610 5271 Pentapetalae View MSA
122791251 5272 Eudicot View MSA
122046189 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121350485 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.1846 0.0 83.2211   High
cufflinks 19.3723 0.0 51.0628    
cufflinks 15.5893 0.0 41.5743    
cufflinks 37.3369 0.0 96.5231 High High
cufflinks 18.2137 0.0 48.4625    
cufflinks 13.2572 0.0 35.8987   Low
cufflinks 17.9254 0.0 47.4768    
cufflinks 15.125 0.0 40.4121    
cufflinks 21.587 0.0 56.6561    
cufflinks 22.9084 0.0 59.8842    
cufflinks 23.6758 0.0 61.946    

0 Strain