Gene : Phvul.007G103800 P. vulgaris v2.1
Defline:  (1 of 2) K07213 - copper chaperone (ATOX1, ATX1, copZ) Genomic Order:  1047
Name:  ? Phvul.007G103800 Secondary Identifier:  ? PAC:37166291
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G103800 0.5kb upstream 0.5kb upstream 3499 true Chr07: 12042643-12046141 Phaseolus vulgaris
Phvul.007G103800 0.5kb upstream 0.5kb upstream 500 false Chr07: 12042643-12043142 Phaseolus vulgaris
Phvul.007G103800 0.5kb downstream 0.5kb downstream 3499 true Chr07: 12043143-12046641 Phaseolus vulgaris
Phvul.007G103800 0.5kb downstream 0.5kb downstream 500 false Chr07: 12046142-12046641 Phaseolus vulgaris
Phvul.007G103800 1.0kb upstream 1.0kb upstream 3999 true Chr07: 12042143-12046141 Phaseolus vulgaris
Phvul.007G103800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 12042143-12043142 Phaseolus vulgaris
Phvul.007G103800 1.0kb downstream 1.0kb downstream 3999 true Chr07: 12043143-12047141 Phaseolus vulgaris
Phvul.007G103800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 12046142-12047141 Phaseolus vulgaris
Phvul.007G103800 2.0kb upstream 2.0kb upstream 4999 true Chr07: 12041143-12046141 Phaseolus vulgaris
Phvul.007G103800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 12041143-12043142 Phaseolus vulgaris
Phvul.007G103800 2.0kb downstream 2.0kb downstream 4999 true Chr07: 12043143-12048141 Phaseolus vulgaris
Phvul.007G103800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 12046142-12048141 Phaseolus vulgaris
Phvul.007G103800 5.0kb upstream 5.0kb upstream 7999 true Chr07: 12038143-12046141 Phaseolus vulgaris
Phvul.007G103800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 12038143-12043142 Phaseolus vulgaris
Phvul.007G103800 5.0kb downstream 5.0kb downstream 7999 true Chr07: 12043143-12051141 Phaseolus vulgaris
Phvul.007G103800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 12046142-12051141 Phaseolus vulgaris
Phvul.007G103800 10.0kb upstream 10.0kb upstream 12999 true Chr07: 12033143-12046141 Phaseolus vulgaris
Phvul.007G103800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 12033143-12043142 Phaseolus vulgaris
Phvul.007G103800 10.0kb downstream 10.0kb downstream 12999 true Chr07: 12043143-12056141 Phaseolus vulgaris
Phvul.007G103800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 12046142-12056141 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040990 5273 Angiosperm View MSA
122314139 5265 Fabidae View MSA
124065552 5270 Rosid View MSA
123743211 5271 Pentapetalae View MSA
122791151 5272 Eudicot View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 168.481 0.0 448.304 High High
cufflinks 58.4207 0.0 151.443 High  
cufflinks 75.6847 0.0 195.633 High  
cufflinks 119.649 0.0 311.964 High  
cufflinks 66.9221 0.0 173.232 High  
cufflinks 49.7659 0.0 129.606 High Low
cufflinks 111.15 0.0 289.428 High  
cufflinks 102.979 0.0 267.498 High  
cufflinks 135.818 0.0 357.147 High High
cufflinks 47.6407 0.0 124.451 High Low
cufflinks 80.2178 0.0 207.355 High  

0 Strain