Gene : Phvul.004G156800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10759//PTHR10759:SF6 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Genomic Order:  1611
Name:  ? Phvul.004G156800 Secondary Identifier:  ? PAC:37163168
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G156800 0.5kb upstream 0.5kb upstream 4250 true Chr04: 46133803-46138052 Phaseolus vulgaris
Phvul.004G156800 0.5kb upstream 0.5kb upstream 500 false Chr04: 46133803-46134302 Phaseolus vulgaris
Phvul.004G156800 0.5kb downstream 0.5kb downstream 4250 true Chr04: 46134303-46138552 Phaseolus vulgaris
Phvul.004G156800 0.5kb downstream 0.5kb downstream 500 false Chr04: 46138053-46138552 Phaseolus vulgaris
Phvul.004G156800 1.0kb upstream 1.0kb upstream 4750 true Chr04: 46133303-46138052 Phaseolus vulgaris
Phvul.004G156800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46133303-46134302 Phaseolus vulgaris
Phvul.004G156800 1.0kb downstream 1.0kb downstream 4750 true Chr04: 46134303-46139052 Phaseolus vulgaris
Phvul.004G156800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46138053-46139052 Phaseolus vulgaris
Phvul.004G156800 2.0kb upstream 2.0kb upstream 5750 true Chr04: 46132303-46138052 Phaseolus vulgaris
Phvul.004G156800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46132303-46134302 Phaseolus vulgaris
Phvul.004G156800 2.0kb downstream 2.0kb downstream 5750 true Chr04: 46134303-46140052 Phaseolus vulgaris
Phvul.004G156800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46138053-46140052 Phaseolus vulgaris
Phvul.004G156800 5.0kb upstream 5.0kb upstream 8750 true Chr04: 46129303-46138052 Phaseolus vulgaris
Phvul.004G156800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46129303-46134302 Phaseolus vulgaris
Phvul.004G156800 5.0kb downstream 5.0kb downstream 8750 true Chr04: 46134303-46143052 Phaseolus vulgaris
Phvul.004G156800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46138053-46143052 Phaseolus vulgaris
Phvul.004G156800 10.0kb upstream 10.0kb upstream 13750 true Chr04: 46124303-46138052 Phaseolus vulgaris
Phvul.004G156800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46124303-46134302 Phaseolus vulgaris
Phvul.004G156800 10.0kb downstream 10.0kb downstream 13750 true Chr04: 46134303-46148052 Phaseolus vulgaris
Phvul.004G156800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46138053-46148052 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302778 5265 Fabidae View MSA
124068930 5270 Rosid View MSA
123742877 5271 Pentapetalae View MSA
122788771 5272 Eudicot View MSA
122042848 5273 Angiosperm View MSA
121310034 5274 Embryophyte View MSA
123347637 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.34158 0.0 4.27259    
cufflinks 1.41901 0.0 4.49567    
cufflinks 1.636 0.0 5.07117    
cufflinks 1.68633 0.0 5.28787    
cufflinks 2.75487 0.0 8.17433    
cufflinks 2.35072 0.0 7.0099    
cufflinks 7.70963 0.0 20.5305   High
cufflinks 5.72386 0.0 15.571   High
cufflinks 3.5286 0.0 10.0651    
cufflinks 1.00183 0.0 3.31388   Low
cufflinks 4.03833 0.0 11.4615    

0 Strain