Gene : Phvul.004G156500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Genomic Order:  1608
Name:  ? Phvul.004G156500 Secondary Identifier:  ? PAC:37161815
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G156500 0.5kb upstream 0.5kb upstream 6715 true Chr04: 46096670-46103384 Phaseolus vulgaris
Phvul.004G156500 0.5kb upstream 0.5kb upstream 500 false Chr04: 46096670-46097169 Phaseolus vulgaris
Phvul.004G156500 0.5kb downstream 0.5kb downstream 6715 true Chr04: 46097170-46103884 Phaseolus vulgaris
Phvul.004G156500 0.5kb downstream 0.5kb downstream 500 false Chr04: 46103385-46103884 Phaseolus vulgaris
Phvul.004G156500 1.0kb upstream 1.0kb upstream 7215 true Chr04: 46096170-46103384 Phaseolus vulgaris
Phvul.004G156500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46096170-46097169 Phaseolus vulgaris
Phvul.004G156500 1.0kb downstream 1.0kb downstream 7215 true Chr04: 46097170-46104384 Phaseolus vulgaris
Phvul.004G156500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46103385-46104384 Phaseolus vulgaris
Phvul.004G156500 2.0kb upstream 2.0kb upstream 8215 true Chr04: 46095170-46103384 Phaseolus vulgaris
Phvul.004G156500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46095170-46097169 Phaseolus vulgaris
Phvul.004G156500 2.0kb downstream 2.0kb downstream 8215 true Chr04: 46097170-46105384 Phaseolus vulgaris
Phvul.004G156500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46103385-46105384 Phaseolus vulgaris
Phvul.004G156500 5.0kb upstream 5.0kb upstream 11215 true Chr04: 46092170-46103384 Phaseolus vulgaris
Phvul.004G156500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46092170-46097169 Phaseolus vulgaris
Phvul.004G156500 5.0kb downstream 5.0kb downstream 11215 true Chr04: 46097170-46108384 Phaseolus vulgaris
Phvul.004G156500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46103385-46108384 Phaseolus vulgaris
Phvul.004G156500 10.0kb upstream 10.0kb upstream 16215 true Chr04: 46087170-46103384 Phaseolus vulgaris
Phvul.004G156500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46087170-46097169 Phaseolus vulgaris
Phvul.004G156500 10.0kb downstream 10.0kb downstream 16215 true Chr04: 46097170-46113384 Phaseolus vulgaris
Phvul.004G156500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46103385-46113384 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305751 5265 Fabidae View MSA
124064861 5270 Rosid View MSA
123736794 5271 Pentapetalae View MSA
122787221 5272 Eudicot View MSA
122048016 5273 Angiosperm View MSA
121349891 5274 Embryophyte View MSA
123381486 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.66732 0.0 24.6195    
cufflinks 12.8093 0.0 41.0701    
cufflinks 54.4927 0.0 222.592 High High
cufflinks 5.59852 0.0 19.0754    
cufflinks 10.419 0.0 33.0393    
cufflinks 42.3729 0.0 162.572 High High
cufflinks 6.75142 0.0 22.1416    
cufflinks 6.47917 0.0 21.24    
cufflinks 6.57735 0.0 18.775    
cufflinks 12.687 0.0 40.3433    
cufflinks 6.62067 0.0 18.9259    

0 Strain