Gene : Phvul.007G106200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23151:SF56 - DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 1 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL Genomic Order:  1072
Name:  ? Phvul.007G106200 Secondary Identifier:  ? PAC:37166977
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5173 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PYRUVDEHYD-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G106200 0.5kb upstream 0.5kb upstream 13715 true Chr07: 12570044-12583758 Phaseolus vulgaris
Phvul.007G106200 0.5kb upstream 0.5kb upstream 500 false Chr07: 12583259-12583758 Phaseolus vulgaris
Phvul.007G106200 0.5kb downstream 0.5kb downstream 13715 true Chr07: 12569544-12583258 Phaseolus vulgaris
Phvul.007G106200 0.5kb downstream 0.5kb downstream 500 false Chr07: 12569544-12570043 Phaseolus vulgaris
Phvul.007G106200 1.0kb upstream 1.0kb upstream 14215 true Chr07: 12570044-12584258 Phaseolus vulgaris
Phvul.007G106200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 12583259-12584258 Phaseolus vulgaris
Phvul.007G106200 1.0kb downstream 1.0kb downstream 14215 true Chr07: 12569044-12583258 Phaseolus vulgaris
Phvul.007G106200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 12569044-12570043 Phaseolus vulgaris
Phvul.007G106200 2.0kb upstream 2.0kb upstream 15215 true Chr07: 12570044-12585258 Phaseolus vulgaris
Phvul.007G106200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 12583259-12585258 Phaseolus vulgaris
Phvul.007G106200 2.0kb downstream 2.0kb downstream 15215 true Chr07: 12568044-12583258 Phaseolus vulgaris
Phvul.007G106200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 12568044-12570043 Phaseolus vulgaris
Phvul.007G106200 5.0kb upstream 5.0kb upstream 18215 true Chr07: 12570044-12588258 Phaseolus vulgaris
Phvul.007G106200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 12583259-12588258 Phaseolus vulgaris
Phvul.007G106200 5.0kb downstream 5.0kb downstream 18215 true Chr07: 12565044-12583258 Phaseolus vulgaris
Phvul.007G106200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 12565044-12570043 Phaseolus vulgaris
Phvul.007G106200 10.0kb upstream 10.0kb upstream 23215 true Chr07: 12570044-12593258 Phaseolus vulgaris
Phvul.007G106200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 12583259-12593258 Phaseolus vulgaris
Phvul.007G106200 10.0kb downstream 10.0kb downstream 23215 true Chr07: 12560044-12583258 Phaseolus vulgaris
Phvul.007G106200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 12560044-12570043 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040991 5273 Angiosperm View MSA
122303087 5265 Fabidae View MSA
124066791 5270 Rosid View MSA
123740075 5271 Pentapetalae View MSA
122787937 5272 Eudicot View MSA
121346587 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.98821 0.0 18.7017   Low
cufflinks 11.4695 0.0 29.8415    
cufflinks 11.4448 0.0 29.75    
cufflinks 11.1982 0.0 29.248    
cufflinks 9.5238 0.0 25.142    
cufflinks 11.1732 0.0 29.0803    
cufflinks 14.4878 0.0 37.4797    
cufflinks 17.9353 0.0 46.3927   High
cufflinks 17.4661 0.0 45.1482   High
cufflinks 11.2113 0.0 29.2273    
cufflinks 10.0183 0.0 26.3197    

0 Strain