Gene : Phvul.007G107500 P. vulgaris v2.1
Defline:  (1 of 2) PF04689 - DNA binding protein S1FA (S1FA) Genomic Order:  1085
Name:  ? Phvul.007G107500 Secondary Identifier:  ? PAC:37166054
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G107500 0.5kb upstream 0.5kb upstream 3093 true Chr07: 13261672-13264764 Phaseolus vulgaris
Phvul.007G107500 0.5kb upstream 0.5kb upstream 500 false Chr07: 13261672-13262171 Phaseolus vulgaris
Phvul.007G107500 0.5kb downstream 0.5kb downstream 3093 true Chr07: 13262172-13265264 Phaseolus vulgaris
Phvul.007G107500 0.5kb downstream 0.5kb downstream 500 false Chr07: 13264765-13265264 Phaseolus vulgaris
Phvul.007G107500 1.0kb upstream 1.0kb upstream 3593 true Chr07: 13261172-13264764 Phaseolus vulgaris
Phvul.007G107500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 13261172-13262171 Phaseolus vulgaris
Phvul.007G107500 1.0kb downstream 1.0kb downstream 3593 true Chr07: 13262172-13265764 Phaseolus vulgaris
Phvul.007G107500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 13264765-13265764 Phaseolus vulgaris
Phvul.007G107500 2.0kb upstream 2.0kb upstream 4593 true Chr07: 13260172-13264764 Phaseolus vulgaris
Phvul.007G107500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 13260172-13262171 Phaseolus vulgaris
Phvul.007G107500 2.0kb downstream 2.0kb downstream 4593 true Chr07: 13262172-13266764 Phaseolus vulgaris
Phvul.007G107500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 13264765-13266764 Phaseolus vulgaris
Phvul.007G107500 5.0kb upstream 5.0kb upstream 7593 true Chr07: 13257172-13264764 Phaseolus vulgaris
Phvul.007G107500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 13257172-13262171 Phaseolus vulgaris
Phvul.007G107500 5.0kb downstream 5.0kb downstream 7593 true Chr07: 13262172-13269764 Phaseolus vulgaris
Phvul.007G107500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 13264765-13269764 Phaseolus vulgaris
Phvul.007G107500 10.0kb upstream 10.0kb upstream 12593 true Chr07: 13252172-13264764 Phaseolus vulgaris
Phvul.007G107500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 13252172-13262171 Phaseolus vulgaris
Phvul.007G107500 10.0kb downstream 10.0kb downstream 12593 true Chr07: 13262172-13274764 Phaseolus vulgaris
Phvul.007G107500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 13264765-13274764 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314911 5265 Fabidae View MSA
124072981 5270 Rosid View MSA
123737757 5271 Pentapetalae View MSA
122787039 5272 Eudicot View MSA
122043521 5273 Angiosperm View MSA
121348101 5274 Embryophyte View MSA
123427366 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.7541 0.0 74.1279    
cufflinks 35.566 0.0 96.454 High  
cufflinks 25.3597 0.0 70.7916   Low
cufflinks 46.8129 0.0 123.944 High  
cufflinks 50.815 0.0 134.61 High High
cufflinks 39.3532 0.0 105.858 High  
cufflinks 33.5208 0.0 91.0645 High  
cufflinks 45.3086 0.0 120.398 High  
cufflinks 32.4189 0.0 88.4893 High  
cufflinks 19.5261 0.0 56.0878   Low
cufflinks 59.0237 0.0 154.68 High High

0 Strain