Gene : Phvul.004G156132 P. vulgaris v2.1
Defline:  (1 of 3) K02993 - small subunit ribosomal protein S7e (RP-S7e, RPS7) Genomic Order:  1602
Name:  ? Phvul.004G156132 Secondary Identifier:  ? PAC:37163552
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G156132 0.5kb upstream 0.5kb upstream 2862 true Chr04: 46041824-46044685 Phaseolus vulgaris
Phvul.004G156132 0.5kb upstream 0.5kb upstream 500 false Chr04: 46044186-46044685 Phaseolus vulgaris
Phvul.004G156132 0.5kb downstream 0.5kb downstream 2862 true Chr04: 46041324-46044185 Phaseolus vulgaris
Phvul.004G156132 0.5kb downstream 0.5kb downstream 500 false Chr04: 46041324-46041823 Phaseolus vulgaris
Phvul.004G156132 1.0kb upstream 1.0kb upstream 3362 true Chr04: 46041824-46045185 Phaseolus vulgaris
Phvul.004G156132 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46044186-46045185 Phaseolus vulgaris
Phvul.004G156132 1.0kb downstream 1.0kb downstream 3362 true Chr04: 46040824-46044185 Phaseolus vulgaris
Phvul.004G156132 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46040824-46041823 Phaseolus vulgaris
Phvul.004G156132 2.0kb upstream 2.0kb upstream 4362 true Chr04: 46041824-46046185 Phaseolus vulgaris
Phvul.004G156132 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46044186-46046185 Phaseolus vulgaris
Phvul.004G156132 2.0kb downstream 2.0kb downstream 4362 true Chr04: 46039824-46044185 Phaseolus vulgaris
Phvul.004G156132 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46039824-46041823 Phaseolus vulgaris
Phvul.004G156132 5.0kb upstream 5.0kb upstream 7362 true Chr04: 46041824-46049185 Phaseolus vulgaris
Phvul.004G156132 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46044186-46049185 Phaseolus vulgaris
Phvul.004G156132 5.0kb downstream 5.0kb downstream 7362 true Chr04: 46036824-46044185 Phaseolus vulgaris
Phvul.004G156132 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46036824-46041823 Phaseolus vulgaris
Phvul.004G156132 10.0kb upstream 10.0kb upstream 12362 true Chr04: 46041824-46054185 Phaseolus vulgaris
Phvul.004G156132 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46044186-46054185 Phaseolus vulgaris
Phvul.004G156132 10.0kb downstream 10.0kb downstream 12362 true Chr04: 46031824-46044185 Phaseolus vulgaris
Phvul.004G156132 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46031824-46041823 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309185 5265 Fabidae View MSA
124072179 5270 Rosid View MSA
123738806 5271 Pentapetalae View MSA
122790365 5272 Eudicot View MSA
122049624 5273 Angiosperm View MSA
121350369 5274 Embryophyte View MSA
123424764 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 100.606 0.0 339.973 High  
cufflinks 114.058 0.0 395.026 High  
cufflinks 55.4727 0.0 179.538 High Low
cufflinks 117.219 0.0 402.319 High High
cufflinks 88.6981 0.0 292.971 High  
cufflinks 57.515 0.0 185.718 High Low
cufflinks 80.4732 0.0 265.174 High  
cufflinks 105.68 0.0 363.668 High  
cufflinks 100.007 0.0 337.163 High  
cufflinks 51.4065 0.0 166.238 High Low
cufflinks 96.2707 0.0 322.508 High  

0 Strain