Gene : Phvul.004G156400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10774:SF1 - C2 DOMAIN-CONTAINING PROTEIN Genomic Order:  1607
Name:  ? Phvul.004G156400 Secondary Identifier:  ? PAC:37162537
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G156400 0.5kb upstream 0.5kb upstream 8189 true Chr04: 46086774-46094962 Phaseolus vulgaris
Phvul.004G156400 0.5kb upstream 0.5kb upstream 500 false Chr04: 46086774-46087273 Phaseolus vulgaris
Phvul.004G156400 0.5kb downstream 0.5kb downstream 8189 true Chr04: 46087274-46095462 Phaseolus vulgaris
Phvul.004G156400 0.5kb downstream 0.5kb downstream 500 false Chr04: 46094963-46095462 Phaseolus vulgaris
Phvul.004G156400 1.0kb upstream 1.0kb upstream 8689 true Chr04: 46086274-46094962 Phaseolus vulgaris
Phvul.004G156400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46086274-46087273 Phaseolus vulgaris
Phvul.004G156400 1.0kb downstream 1.0kb downstream 8689 true Chr04: 46087274-46095962 Phaseolus vulgaris
Phvul.004G156400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46094963-46095962 Phaseolus vulgaris
Phvul.004G156400 2.0kb upstream 2.0kb upstream 9689 true Chr04: 46085274-46094962 Phaseolus vulgaris
Phvul.004G156400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46085274-46087273 Phaseolus vulgaris
Phvul.004G156400 2.0kb downstream 2.0kb downstream 9689 true Chr04: 46087274-46096962 Phaseolus vulgaris
Phvul.004G156400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46094963-46096962 Phaseolus vulgaris
Phvul.004G156400 5.0kb upstream 5.0kb upstream 12689 true Chr04: 46082274-46094962 Phaseolus vulgaris
Phvul.004G156400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46082274-46087273 Phaseolus vulgaris
Phvul.004G156400 5.0kb downstream 5.0kb downstream 12689 true Chr04: 46087274-46099962 Phaseolus vulgaris
Phvul.004G156400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46094963-46099962 Phaseolus vulgaris
Phvul.004G156400 10.0kb upstream 10.0kb upstream 17689 true Chr04: 46077274-46094962 Phaseolus vulgaris
Phvul.004G156400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46077274-46087273 Phaseolus vulgaris
Phvul.004G156400 10.0kb downstream 10.0kb downstream 17689 true Chr04: 46087274-46104962 Phaseolus vulgaris
Phvul.004G156400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46094963-46104962 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306282 5265 Fabidae View MSA
124062290 5270 Rosid View MSA
123740991 5271 Pentapetalae View MSA
122797342 5272 Eudicot View MSA
122043869 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121345118 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6018 0.0 38.7582   High
cufflinks 5.29625 0.0 19.9878    
cufflinks 4.66816 0.0 17.5876    
cufflinks 2.12348 0.0 9.17496   Low
cufflinks 2.89067 0.0 12.8886    
cufflinks 1.95738 0.0 10.5838   Low
cufflinks 11.549 0.0 38.1897   High
cufflinks 8.68147 0.0 29.4332    
cufflinks 10.7326 0.0 36.0176   High
cufflinks 8.01848 0.0 28.1434    
cufflinks 2.94362 0.0 12.9996    

0 Strain