Gene : Phvul.007G111400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32285:SF18 - PROTEIN YLS7-RELATED Genomic Order:  1196
Name:  ? Phvul.007G111400 Secondary Identifier:  ? PAC:37165221
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G111400 0.5kb upstream 0.5kb upstream 5901 true Chr07: 20620048-20625948 Phaseolus vulgaris
Phvul.007G111400 0.5kb upstream 0.5kb upstream 500 false Chr07: 20625449-20625948 Phaseolus vulgaris
Phvul.007G111400 0.5kb downstream 0.5kb downstream 5901 true Chr07: 20619548-20625448 Phaseolus vulgaris
Phvul.007G111400 0.5kb downstream 0.5kb downstream 500 false Chr07: 20619548-20620047 Phaseolus vulgaris
Phvul.007G111400 1.0kb upstream 1.0kb upstream 6401 true Chr07: 20620048-20626448 Phaseolus vulgaris
Phvul.007G111400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 20625449-20626448 Phaseolus vulgaris
Phvul.007G111400 1.0kb downstream 1.0kb downstream 6401 true Chr07: 20619048-20625448 Phaseolus vulgaris
Phvul.007G111400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 20619048-20620047 Phaseolus vulgaris
Phvul.007G111400 2.0kb upstream 2.0kb upstream 7401 true Chr07: 20620048-20627448 Phaseolus vulgaris
Phvul.007G111400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 20625449-20627448 Phaseolus vulgaris
Phvul.007G111400 2.0kb downstream 2.0kb downstream 7401 true Chr07: 20618048-20625448 Phaseolus vulgaris
Phvul.007G111400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 20618048-20620047 Phaseolus vulgaris
Phvul.007G111400 5.0kb upstream 5.0kb upstream 10401 true Chr07: 20620048-20630448 Phaseolus vulgaris
Phvul.007G111400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 20625449-20630448 Phaseolus vulgaris
Phvul.007G111400 5.0kb downstream 5.0kb downstream 10401 true Chr07: 20615048-20625448 Phaseolus vulgaris
Phvul.007G111400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 20615048-20620047 Phaseolus vulgaris
Phvul.007G111400 10.0kb upstream 10.0kb upstream 15401 true Chr07: 20620048-20635448 Phaseolus vulgaris
Phvul.007G111400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 20625449-20635448 Phaseolus vulgaris
Phvul.007G111400 10.0kb downstream 10.0kb downstream 15401 true Chr07: 20610048-20625448 Phaseolus vulgaris
Phvul.007G111400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 20610048-20620047 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305185 5265 Fabidae View MSA
124061312 5270 Rosid View MSA
123751556 5271 Pentapetalae View MSA
122785913 5272 Eudicot View MSA
122043829 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121345496 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.02903 0.0 13.8772   Low
cufflinks 6.08666 0.0 16.5336    
cufflinks 6.83806 0.0 18.3885    
cufflinks 9.00808 0.0 23.8633   High
cufflinks 7.60115 0.0 20.362    
cufflinks 7.26399 0.0 19.4386    
cufflinks 6.46973 0.0 17.4294    
cufflinks 5.6515 0.0 15.3695   Low
cufflinks 6.41565 0.0 17.3363    
cufflinks 7.87271 0.0 20.9875    
cufflinks 8.63477 0.0 22.8955   High

0 Strain