Gene : Phvul.007G111300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31371:SF4 - SIMILARITY TO UNKNOWN PROTEIN Genomic Order:  1197
Name:  ? Phvul.007G111300 Secondary Identifier:  ? PAC:37165540
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G111300 0.5kb upstream 0.5kb upstream 1940 true Chr07: 20653222-20655161 Phaseolus vulgaris
Phvul.007G111300 0.5kb upstream 0.5kb upstream 500 false Chr07: 20653222-20653721 Phaseolus vulgaris
Phvul.007G111300 0.5kb downstream 0.5kb downstream 1940 true Chr07: 20653722-20655661 Phaseolus vulgaris
Phvul.007G111300 0.5kb downstream 0.5kb downstream 500 false Chr07: 20655162-20655661 Phaseolus vulgaris
Phvul.007G111300 1.0kb upstream 1.0kb upstream 2440 true Chr07: 20652722-20655161 Phaseolus vulgaris
Phvul.007G111300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 20652722-20653721 Phaseolus vulgaris
Phvul.007G111300 1.0kb downstream 1.0kb downstream 2440 true Chr07: 20653722-20656161 Phaseolus vulgaris
Phvul.007G111300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 20655162-20656161 Phaseolus vulgaris
Phvul.007G111300 2.0kb upstream 2.0kb upstream 3440 true Chr07: 20651722-20655161 Phaseolus vulgaris
Phvul.007G111300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 20651722-20653721 Phaseolus vulgaris
Phvul.007G111300 2.0kb downstream 2.0kb downstream 3440 true Chr07: 20653722-20657161 Phaseolus vulgaris
Phvul.007G111300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 20655162-20657161 Phaseolus vulgaris
Phvul.007G111300 5.0kb upstream 5.0kb upstream 6440 true Chr07: 20648722-20655161 Phaseolus vulgaris
Phvul.007G111300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 20648722-20653721 Phaseolus vulgaris
Phvul.007G111300 5.0kb downstream 5.0kb downstream 6440 true Chr07: 20653722-20660161 Phaseolus vulgaris
Phvul.007G111300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 20655162-20660161 Phaseolus vulgaris
Phvul.007G111300 10.0kb upstream 10.0kb upstream 11440 true Chr07: 20643722-20655161 Phaseolus vulgaris
Phvul.007G111300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 20643722-20653721 Phaseolus vulgaris
Phvul.007G111300 10.0kb downstream 10.0kb downstream 11440 true Chr07: 20653722-20665161 Phaseolus vulgaris
Phvul.007G111300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 20655162-20665161 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302430 5265 Fabidae View MSA
124067622 5270 Rosid View MSA
123740922 5271 Pentapetalae View MSA
122785631 5272 Eudicot View MSA
122049619 5273 Angiosperm View MSA
121344351 5274 Embryophyte View MSA
123380027 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.858857 0.0 3.00845    
cufflinks 1.73071 0.0 5.61801    
cufflinks 1.33393 0.0 4.47924    
cufflinks 1.2429 0.0 4.18755    
cufflinks 8.83573 0.0 24.1347   High
cufflinks 2.21006 0.0 6.98096    
cufflinks 3.62619 0.0 10.7375    
cufflinks 0.885781 0.0 3.09338    
cufflinks 5.71371 0.0 16.1729   High
cufflinks 0.56394 0.0 2.06333   Low
cufflinks 8.48521 0.0 23.1967   High

0 Strain