Gene : Phvul.007G110900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11817:SF14 - PLASTIDIAL PYRUVATE KINASE 1, CHLOROPLASTIC Genomic Order:  1201
Name:  ? Phvul.007G110900 Secondary Identifier:  ? PAC:37166046
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ANAEROFRUCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris ANAGLYCOLYSIS-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-1042 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5723 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G110900 0.5kb upstream 0.5kb upstream 8218 true Chr07: 20776611-20784828 Phaseolus vulgaris
Phvul.007G110900 0.5kb upstream 0.5kb upstream 500 false Chr07: 20776611-20777110 Phaseolus vulgaris
Phvul.007G110900 0.5kb downstream 0.5kb downstream 8218 true Chr07: 20777111-20785328 Phaseolus vulgaris
Phvul.007G110900 0.5kb downstream 0.5kb downstream 500 false Chr07: 20784829-20785328 Phaseolus vulgaris
Phvul.007G110900 1.0kb upstream 1.0kb upstream 8718 true Chr07: 20776111-20784828 Phaseolus vulgaris
Phvul.007G110900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 20776111-20777110 Phaseolus vulgaris
Phvul.007G110900 1.0kb downstream 1.0kb downstream 8718 true Chr07: 20777111-20785828 Phaseolus vulgaris
Phvul.007G110900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 20784829-20785828 Phaseolus vulgaris
Phvul.007G110900 2.0kb upstream 2.0kb upstream 9718 true Chr07: 20775111-20784828 Phaseolus vulgaris
Phvul.007G110900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 20775111-20777110 Phaseolus vulgaris
Phvul.007G110900 2.0kb downstream 2.0kb downstream 9718 true Chr07: 20777111-20786828 Phaseolus vulgaris
Phvul.007G110900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 20784829-20786828 Phaseolus vulgaris
Phvul.007G110900 5.0kb upstream 5.0kb upstream 12718 true Chr07: 20772111-20784828 Phaseolus vulgaris
Phvul.007G110900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 20772111-20777110 Phaseolus vulgaris
Phvul.007G110900 5.0kb downstream 5.0kb downstream 12718 true Chr07: 20777111-20789828 Phaseolus vulgaris
Phvul.007G110900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 20784829-20789828 Phaseolus vulgaris
Phvul.007G110900 10.0kb upstream 10.0kb upstream 17718 true Chr07: 20767111-20784828 Phaseolus vulgaris
Phvul.007G110900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 20767111-20777110 Phaseolus vulgaris
Phvul.007G110900 10.0kb downstream 10.0kb downstream 17718 true Chr07: 20777111-20794828 Phaseolus vulgaris
Phvul.007G110900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 20784829-20794828 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307363 5265 Fabidae View MSA
124069917 5270 Rosid View MSA
123742502 5271 Pentapetalae View MSA
122795154 5272 Eudicot View MSA
122047085 5273 Angiosperm View MSA
121351198 5274 Embryophyte View MSA
123423773 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6358 0.0 45.5862    
cufflinks 35.7846 0.0 94.3713 High  
cufflinks 35.0355 0.0 92.2399    
cufflinks 53.8655 0.0 146.97 High High
cufflinks 33.8802 0.0 89.2638 High  
cufflinks 40.9036 0.0 108.869 High  
cufflinks 14.2722 0.0 36.9673   Low
cufflinks 15.1279 0.0 39.1701   Low
cufflinks 21.1361 0.0 54.6864    
cufflinks 19.1263 0.0 49.4413    
cufflinks 32.9264 0.0 86.5395    

0 Strain