Gene : Phvul.007G112500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31301:SF12 - LOB DOMAIN-CONTAINING PROTEIN 25 Genomic Order:  1153
Name:  ? Phvul.007G112500 Secondary Identifier:  ? PAC:37164993
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G112500 0.5kb upstream 0.5kb upstream 1041 true Chr07: 17957464-17958504 Phaseolus vulgaris
Phvul.007G112500 0.5kb upstream 0.5kb upstream 500 false Chr07: 17958005-17958504 Phaseolus vulgaris
Phvul.007G112500 0.5kb downstream 0.5kb downstream 1041 true Chr07: 17956964-17958004 Phaseolus vulgaris
Phvul.007G112500 0.5kb downstream 0.5kb downstream 500 false Chr07: 17956964-17957463 Phaseolus vulgaris
Phvul.007G112500 1.0kb upstream 1.0kb upstream 1541 true Chr07: 17957464-17959004 Phaseolus vulgaris
Phvul.007G112500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17958005-17959004 Phaseolus vulgaris
Phvul.007G112500 1.0kb downstream 1.0kb downstream 1541 true Chr07: 17956464-17958004 Phaseolus vulgaris
Phvul.007G112500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 17956464-17957463 Phaseolus vulgaris
Phvul.007G112500 2.0kb upstream 2.0kb upstream 2541 true Chr07: 17957464-17960004 Phaseolus vulgaris
Phvul.007G112500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17958005-17960004 Phaseolus vulgaris
Phvul.007G112500 2.0kb downstream 2.0kb downstream 2541 true Chr07: 17955464-17958004 Phaseolus vulgaris
Phvul.007G112500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 17955464-17957463 Phaseolus vulgaris
Phvul.007G112500 5.0kb upstream 5.0kb upstream 5541 true Chr07: 17957464-17963004 Phaseolus vulgaris
Phvul.007G112500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17958005-17963004 Phaseolus vulgaris
Phvul.007G112500 5.0kb downstream 5.0kb downstream 5541 true Chr07: 17952464-17958004 Phaseolus vulgaris
Phvul.007G112500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 17952464-17957463 Phaseolus vulgaris
Phvul.007G112500 10.0kb upstream 10.0kb upstream 10541 true Chr07: 17957464-17968004 Phaseolus vulgaris
Phvul.007G112500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17958005-17968004 Phaseolus vulgaris
Phvul.007G112500 10.0kb downstream 10.0kb downstream 10541 true Chr07: 17947464-17958004 Phaseolus vulgaris
Phvul.007G112500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 17947464-17957463 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255509 5265 Fabidae View MSA
124070294 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.598208 0.0 2.45004    
cufflinks 0.0772145 0.0 0.385657 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.144473 0.0 0.67838 Low  
cufflinks 0.10576 0.0 0.509922 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.95473 0.0 7.29088   High

0 Strain