Gene : Phvul.007G107800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11909:SF178 - CASEIN KINASE 1-LIKE PROTEIN 8 Genomic Order:  1088
Name:  ? Phvul.007G107800 Secondary Identifier:  ? PAC:37165131
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G107800 0.5kb upstream 0.5kb upstream 6046 true Chr07: 13403511-13409556 Phaseolus vulgaris
Phvul.007G107800 0.5kb upstream 0.5kb upstream 500 false Chr07: 13409057-13409556 Phaseolus vulgaris
Phvul.007G107800 0.5kb downstream 0.5kb downstream 6046 true Chr07: 13403011-13409056 Phaseolus vulgaris
Phvul.007G107800 0.5kb downstream 0.5kb downstream 500 false Chr07: 13403011-13403510 Phaseolus vulgaris
Phvul.007G107800 1.0kb upstream 1.0kb upstream 6546 true Chr07: 13403511-13410056 Phaseolus vulgaris
Phvul.007G107800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 13409057-13410056 Phaseolus vulgaris
Phvul.007G107800 1.0kb downstream 1.0kb downstream 6546 true Chr07: 13402511-13409056 Phaseolus vulgaris
Phvul.007G107800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 13402511-13403510 Phaseolus vulgaris
Phvul.007G107800 2.0kb upstream 2.0kb upstream 7546 true Chr07: 13403511-13411056 Phaseolus vulgaris
Phvul.007G107800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 13409057-13411056 Phaseolus vulgaris
Phvul.007G107800 2.0kb downstream 2.0kb downstream 7546 true Chr07: 13401511-13409056 Phaseolus vulgaris
Phvul.007G107800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 13401511-13403510 Phaseolus vulgaris
Phvul.007G107800 5.0kb upstream 5.0kb upstream 10546 true Chr07: 13403511-13414056 Phaseolus vulgaris
Phvul.007G107800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 13409057-13414056 Phaseolus vulgaris
Phvul.007G107800 5.0kb downstream 5.0kb downstream 10546 true Chr07: 13398511-13409056 Phaseolus vulgaris
Phvul.007G107800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 13398511-13403510 Phaseolus vulgaris
Phvul.007G107800 10.0kb upstream 10.0kb upstream 15546 true Chr07: 13403511-13419056 Phaseolus vulgaris
Phvul.007G107800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 13409057-13419056 Phaseolus vulgaris
Phvul.007G107800 10.0kb downstream 10.0kb downstream 15546 true Chr07: 13393511-13409056 Phaseolus vulgaris
Phvul.007G107800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 13393511-13403510 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311571 5265 Fabidae View MSA
124074608 5270 Rosid View MSA
123745824 5271 Pentapetalae View MSA
122787812 5272 Eudicot View MSA
122045812 5273 Angiosperm View MSA
121310507 5274 Embryophyte View MSA
123427595 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4104 0.0 35.0102   Low
cufflinks 15.6186 0.0 40.5766   Low
cufflinks 28.154 0.0 72.9971   High
cufflinks 14.6576 0.0 38.2649   Low
cufflinks 24.5546 0.0 63.4885    
cufflinks 22.2271 0.0 57.4532    
cufflinks 23.4959 0.0 60.7485    
cufflinks 22.7933 0.0 58.9381    
cufflinks 23.0031 0.0 59.4603    
cufflinks 24.2068 0.0 62.5998    
cufflinks 24.8881 0.0 64.3557    

0 Strain